BLASTX nr result

ID: Glycyrrhiza23_contig00031083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031083
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   126   2e-27
emb|CBI34953.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...    81   1e-13
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...    70   2e-10
ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cuc...    55   6e-06

>ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like
           [Glycine max]
          Length = 1707

 Score =  126 bits (317), Expect = 2e-27
 Identities = 67/97 (69%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
 Frame = +3

Query: 9   QPSGSDSECDWE-GVVEGKNTIFPGHNKVELKSSVADKDDNNESEVEWEDGDCDDTKSTL 185
           QPS SDS+CDWE G++EGK+  +P H+ VELKSSVAD   NNE EVEWE+GDCD   STL
Sbjct: 659 QPSHSDSDCDWEEGILEGKSNAYPEHDVVELKSSVADDHKNNEREVEWEEGDCDGANSTL 718

Query: 186 LAAAESGKLASRGCLEEESDLQEAIRRSLERAQDGKL 296
           L    SGKLAS+G LEEESDLQEAIRRSLE   D KL
Sbjct: 719 L----SGKLASQGWLEEESDLQEAIRRSLESIGDMKL 751


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +3

Query: 9   QPSGSDSECDWE-GVVEGKNTIFPGHNKVELKSSVADKDDNNESEVEWEDGDCDDTKSTL 185
           +P+ S S+ DWE G++E K      +  VE+K SV ++  +++SEVEWE+G CD +K+  
Sbjct: 473 RPADSASDSDWEEGIIEEKGGSCIDNVGVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVS 532

Query: 186 LAAAESGKLASRGCLEEESDLQEAIRRSLE 275
              ++ G  AS+G LEEE+DLQEAIRRSLE
Sbjct: 533 ACPSKFGNPASKGRLEEETDLQEAIRRSLE 562


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +3

Query: 9   QPSGSDSECDWE-GVVEGKNTIFPGHNKVELKSSVADKDDNNESEVEWEDGDCDDTKSTL 185
           +P+ S S+ DWE G++E K      +  VE+K SV ++  +++SEVEWE+G CD +K+  
Sbjct: 473 RPADSASDSDWEEGIIEEKGGSCIDNVGVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVS 532

Query: 186 LAAAESGKLASRGCLEEESDLQEAIRRSLE 275
              ++ G  AS+G LEEE+DLQEAIRRSLE
Sbjct: 533 ACPSKFGNPASKGRLEEETDLQEAIRRSLE 562


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
           gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
           putative [Ricinus communis]
          Length = 1641

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +3

Query: 6   VQPSGSDSECDWE-GVVEGKNTIFPGHNKVELKSSVADKDDNNESEVEWEDGDCDDTKST 182
           +Q S S S+ DWE G +E +      +  +E    + +K+ +++SEVEWEDG  D   S+
Sbjct: 577 IQTSDSASDGDWEEGTIETRGNSSSNNLALETNPPLKEKNISDDSEVEWEDGGGDHENSS 636

Query: 183 LLAAAESGKLASRGCLEEESDLQEAIRRSLE 275
               +ES   ASRG +EEE+DLQEAIRRSLE
Sbjct: 637 F--PSESKMPASRGYMEEEADLQEAIRRSLE 665


>ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
           gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair
           protein UVH3-like [Cucumis sativus]
          Length = 1541

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = +3

Query: 126 NNESEVEWEDGDCDDTKSTLLAAAESGKLASRGCLEEESDLQEAIRRSLE 275
           ++ESEV+WEDG CD   + +   A+  K  S+G LEEE+DLQEAIRRSLE
Sbjct: 606 SDESEVDWEDGVCD-LVNPVPFEADLAKSVSKGSLEEEADLQEAIRRSLE 654


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