BLASTX nr result

ID: Glycyrrhiza23_contig00031065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031065
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543414.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   164   9e-39
ref|XP_003596890.1| U-box domain-containing protein [Medicago tr...   160   8e-38
gb|ACU18170.1| unknown [Glycine max]                                  160   8e-38
ref|XP_002298264.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002513723.1| ubiquitin-protein ligase, putative [Ricinus ...   157   1e-36

>ref|XP_003543414.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 403

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/99 (82%), Positives = 92/99 (92%)
 Frame = -1

Query: 298 VRVLKDQISQQASKSALKLLVELCSWGRNRVKAVEGGAVMVLVELLLDVSERRECELMLV 119
           +RVL+DQISQQASK+ALKL+VEL  WGRNR+K VEGGAV+VLVELLL  SERR CEL+L+
Sbjct: 233 MRVLRDQISQQASKAALKLIVELFPWGRNRIKGVEGGAVLVLVELLLGASERRTCELILI 292

Query: 118 ALGRLCGCAEGRAELLNHGAGVAIVSKKILRVSHLASDR 2
           AL +LCGCAEGRAELLNHGAGVAIVSKKILRVSH+ASDR
Sbjct: 293 ALDQLCGCAEGRAELLNHGAGVAIVSKKILRVSHVASDR 331


>ref|XP_003596890.1| U-box domain-containing protein [Medicago truncatula]
           gi|355485938|gb|AES67141.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 403

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/99 (79%), Positives = 91/99 (91%)
 Frame = -1

Query: 298 VRVLKDQISQQASKSALKLLVELCSWGRNRVKAVEGGAVMVLVELLLDVSERRECELMLV 119
           +RVL D+ISQQASK+ALKLL+EL  WGRNR+KAVEGG V+VL+ELL DVSERR CELML+
Sbjct: 233 MRVLVDKISQQASKAALKLLLELLPWGRNRIKAVEGGVVLVLIELLFDVSERRVCELMLI 292

Query: 118 ALGRLCGCAEGRAELLNHGAGVAIVSKKILRVSHLASDR 2
            L ++CGCAEGRAELLNHGAG+AIVSKKILRVSH+ASDR
Sbjct: 293 GLDQICGCAEGRAELLNHGAGLAIVSKKILRVSHVASDR 331


>gb|ACU18170.1| unknown [Glycine max]
          Length = 385

 Score =  160 bits (406), Expect = 8e-38
 Identities = 81/99 (81%), Positives = 91/99 (91%)
 Frame = -1

Query: 298 VRVLKDQISQQASKSALKLLVELCSWGRNRVKAVEGGAVMVLVELLLDVSERRECELMLV 119
           +RVL+DQISQQASK+ALKL+VEL  WGRNR+K VEGGAV+VLVELLL  SERR CEL+L+
Sbjct: 215 MRVLRDQISQQASKAALKLIVELFPWGRNRIKGVEGGAVLVLVELLLGASERRTCELILI 274

Query: 118 ALGRLCGCAEGRAELLNHGAGVAIVSKKILRVSHLASDR 2
           AL +LCGCAEGRAELLNHGA VAIVSKKILRVSH+ASDR
Sbjct: 275 ALDQLCGCAEGRAELLNHGAEVAIVSKKILRVSHVASDR 313


>ref|XP_002298264.1| predicted protein [Populus trichocarpa] gi|222845522|gb|EEE83069.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/99 (77%), Positives = 89/99 (89%)
 Frame = -1

Query: 298 VRVLKDQISQQASKSALKLLVELCSWGRNRVKAVEGGAVMVLVELLLDVSERRECELMLV 119
           VRVL DQISQQASK+ALKLLVE+C WGRNR+KAVEGGAV VL+ELLLD S++R CEL+L 
Sbjct: 243 VRVLDDQISQQASKAALKLLVEICPWGRNRIKAVEGGAVSVLIELLLDTSDKRACELILA 302

Query: 118 ALGRLCGCAEGRAELLNHGAGVAIVSKKILRVSHLASDR 2
            L  LCGCA+GRAELL HGAG+A+VSKKILRVSH+ASD+
Sbjct: 303 VLELLCGCADGRAELLKHGAGLAVVSKKILRVSHVASDK 341


>ref|XP_002513723.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547174|gb|EEF48670.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/99 (77%), Positives = 87/99 (87%)
 Frame = -1

Query: 298 VRVLKDQISQQASKSALKLLVELCSWGRNRVKAVEGGAVMVLVELLLDVSERRECELMLV 119
           V VL+DQISQQ SK+ALKLLVE+C WGRNR+KAVEGGAV VL+ELLL+ S+RR CEL L+
Sbjct: 242 VHVLRDQISQQTSKAALKLLVEVCPWGRNRIKAVEGGAVTVLIELLLETSDRRSCELTLI 301

Query: 118 ALGRLCGCAEGRAELLNHGAGVAIVSKKILRVSHLASDR 2
            L  LCGCAEGRAE L HGAG+AIVSKKILRVSH+ASDR
Sbjct: 302 ILDLLCGCAEGRAEFLKHGAGLAIVSKKILRVSHVASDR 340


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