BLASTX nr result

ID: Glycyrrhiza23_contig00031052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031052
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein lig...    57   2e-06
emb|CBI30594.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 9/92 (9%)
 Frame = -1

Query: 294 CNRTVSVKILCKYVAFKTDLREGEVELSLVLKPQANI---------VRGERTVDPDKDNI 142
           C  T+S+  LC+YVAF+T L+  EVE+ LV +  + +         +     +DP KD +
Sbjct: 374 CRPTLSINKLCQYVAFQTSLQANEVEIYLVREMNSKVDFSISMSTPISKPGIIDPCKDKL 433

Query: 141 RVLGDQETLGELLETYESISCGYLVMAYKRKL 46
           +VL +QETLG  L+T   I  GYL++AY++K+
Sbjct: 434 QVLEEQETLGR-LKTNNFIH-GYLLLAYRKKV 463


>ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
           vinifera]
          Length = 534

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
 Frame = -1

Query: 294 CNRTVSVKILCKYVAFKTDLREGEVELSLVLKPQANIVRGERTVDPD--KDNIRVLGDQE 121
           C  T+SV+ LC+YVA +T L   EVE+ LV+K Q + +    +  PD   D ++VL  QE
Sbjct: 450 CRPTLSVRHLCQYVALQTPLLADEVEI-LVIKEQLSKLNPSNSSSPDPCSDRLQVLEAQE 508

Query: 120 TLGELLETYESISCGYLVMAYKRKL 46
           TL  +L+T  + +  +L++AY+RKL
Sbjct: 509 TLA-VLKTMRNANQSHLLLAYRRKL 532


>emb|CBI30594.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
 Frame = -1

Query: 294 CNRTVSVKILCKYVAFKTDLREGEVELSLVLKPQANIVRGERTVDPD--KDNIRVLGDQE 121
           C  T+SV+ LC+YVA +T L   EVE+ LV+K Q + +    +  PD   D ++VL  QE
Sbjct: 349 CRPTLSVRHLCQYVALQTPLLADEVEI-LVIKEQLSKLNPSNSSSPDPCSDRLQVLEAQE 407

Query: 120 TLGELLETYESISCGYLVMAYKRKL 46
           TL  +L+T  + +  +L++AY+RKL
Sbjct: 408 TLA-VLKTMRNANQSHLLLAYRRKL 431


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