BLASTX nr result
ID: Glycyrrhiza23_contig00031036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00031036
(313 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi... 154 9e-36
ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|2... 93 3e-17
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,... 86 4e-15
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi... 79 4e-13
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar... 78 8e-13
>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 154 bits (388), Expect = 9e-36
Identities = 75/106 (70%), Positives = 88/106 (83%), Gaps = 3/106 (2%)
Frame = +1
Query: 1 GRLEDARKVLLEMEGNGLLPGGFLCLVFDDHSSTYGS---LDGNRTRFDERTYSVLLNGL 171
GR++DAR+VLLEMEG+G LPGGFL VFDDHS+ G DG R DERTY +LLNGL
Sbjct: 276 GRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGL 335
Query: 172 CRVGRIEKAKEVLAKLEDHGVVPSQVSYNILVNAYCQEGDLNKAIM 309
CRVGRIEKA+EVLAKL ++GV PS++SYNILVNAYCQEGD+ KAI+
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAIL 381
>ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|222865491|gb|EEF02622.1|
predicted protein [Populus trichocarpa]
Length = 707
Score = 92.8 bits (229), Expect = 3e-17
Identities = 48/113 (42%), Positives = 71/113 (62%), Gaps = 11/113 (9%)
Frame = +1
Query: 4 RLEDARKVLLEMEGNGLLPGGFL-CLVFDDHSST----------YGSLDGNRTRFDERTY 150
R+E+AR +L E++ NG +P GF ++FD + Y G + D T
Sbjct: 186 RIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTC 245
Query: 151 SVLLNGLCRVGRIEKAKEVLAKLEDHGVVPSQVSYNILVNAYCQEGDLNKAIM 309
S+LLNGLC+ G++EKA+EVL L +HG+VP +V YN +VN YCQ GD+++AI+
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAIL 298
Score = 61.2 bits (147), Expect = 8e-08
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Frame = +1
Query: 1 GRLEDARKVLLEMEGNGLLPGGFLCLVFDDHSSTYGSLDGNRTRFDER----------TY 150
G++ +A VL +M G G+LP + + D S T G L FDE TY
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTY 455
Query: 151 SVLLNGLCRVGRIEKAKEVLAKLEDHGVVPSQVSYNILVNAYCQEGDLNKAI 306
+ L+ GLC++G++++A+E+ + G P ++YN L++ Y G+ K +
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCL 507
>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 817
Score = 85.5 bits (210), Expect = 4e-15
Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 10/112 (8%)
Frame = +1
Query: 4 RLEDARKVLLEMEGNGLLPGGFLCLVF-------DDHSST---YGSLDGNRTRFDERTYS 153
++++AR +L EME NG +P G+ + DD + Y R + T S
Sbjct: 296 KMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGS 355
Query: 154 VLLNGLCRVGRIEKAKEVLAKLEDHGVVPSQVSYNILVNAYCQEGDLNKAIM 309
+LLNGLC+ G++EKA+E+L K ++G+V +V YN VN YC+ GD+NKAI+
Sbjct: 356 ILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAIL 407
Score = 57.8 bits (138), Expect = 9e-07
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Frame = +1
Query: 1 GRLEDARKVLLEMEGNGLLPGGFLCLVFDDHSSTYGSLDGNRTRFDER----------TY 150
G++ +A VL +M G+LP + + D S G + FDE TY
Sbjct: 505 GKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTY 564
Query: 151 SVLLNGLCRVGRIEKAKEVLAKLEDHGVVPSQVSYNILVNAYCQEGDLNKAI 306
+VL++GLC+ G++ +A++ L ++ G P ++YN L++ Y G+++K +
Sbjct: 565 NVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616
>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 79.0 bits (193), Expect = 4e-13
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Frame = +1
Query: 7 LEDARKVLLEMEGNGLLPGGFLCLVFDDHSSTYGSLDGNRTRFDER----------TYSV 156
+E+A++VL EME G +P F D G++D + T +E T S+
Sbjct: 303 MEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSI 362
Query: 157 LLNGLCRVGRIEKAKEVLAKLEDHGVVPSQVSYNILVNAYCQEGDLNKA 303
LLN LC+ G +EKA+EVL K ++G+ P V +N +VN YCQ GD+NKA
Sbjct: 363 LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKA 411
>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product
[Arabidopsis thaliana] gi|28973713|gb|AAO64173.1|
unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis
thaliana] gi|110737169|dbj|BAF00534.1| hypothetical
protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 77.8 bits (190), Expect = 8e-13
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 10/113 (8%)
Frame = +1
Query: 1 GRLEDARKVLLEMEGNGLLPGGF-LCLVFDDHSST---------YGSLDGNRTRFDERTY 150
G +EDA VL EM+ G +P F ++FD +SS Y + + + + T
Sbjct: 298 GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357
Query: 151 SVLLNGLCRVGRIEKAKEVLAKLEDHGVVPSQVSYNILVNAYCQEGDLNKAIM 309
S+LLN LC+ G+IEKA+E+L + G+VP++V YN +++ YC++GDL A M
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410