BLASTX nr result

ID: Glycyrrhiza23_contig00031028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031028
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524753.1| PREDICTED: phytoene dehydrogenase, chloropla...    45   2e-07
ref|XP_002266648.1| PREDICTED: phytoene dehydrogenase, chloropla...    47   2e-06

>ref|XP_003524753.1| PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like
           [Glycine max]
          Length = 476

 Score = 45.1 bits (105), Expect(2) = 2e-07
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +3

Query: 3   FDFIFKCVTLGDNTLPANGISTIP 74
           F+FIFKC+ LGDNTLPA GIS IP
Sbjct: 228 FNFIFKCLALGDNTLPARGISAIP 251



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = +2

Query: 74  EQLAVRLPPGSVLLNSKADIVRINASQESLL 166
           EQLA RLP GS+LLNSKA  V ++ S   L+
Sbjct: 252 EQLAARLPSGSILLNSKAVSVDLDNSDSPLV 282


>ref|XP_002266648.1| PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic
           [Vitis vinifera] gi|296081484|emb|CBI20007.3| unnamed
           protein product [Vitis vinifera]
          Length = 463

 Score = 47.0 bits (110), Expect(2) = 2e-06
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +3

Query: 3   FDFIFKCVTLGDNTLPANGISTIP 74
           FDFIFKC+ LGDNTLPA GIS IP
Sbjct: 219 FDFIFKCLALGDNTLPAKGISAIP 242



 Score = 29.6 bits (65), Expect(2) = 2e-06
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 74  EQLAVRLPPGSVLLNSK 124
           EQLA +LP GSVLLNSK
Sbjct: 243 EQLASKLPTGSVLLNSK 259


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