BLASTX nr result

ID: Glycyrrhiza23_contig00031009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031009
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like...   124   2e-26
ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like...   122   5e-26
ref|XP_003605955.1| DNA repair protein RAD5 [Medicago truncatula...   120   3e-25

>ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 926

 Score =  124 bits (310), Expect = 2e-26
 Identities = 87/207 (42%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
 Frame = +2

Query: 119 MLLRPRRRRSDTMVSEAGKEKQPSDAIE--EVEIDGLCSNGTDE------DDNDAPSKLD 274
           M LR RRR S+  VS  GKE+QP D     +    G  SN  D+       D+D  S  D
Sbjct: 1   MELRSRRRLSNPSVS--GKEQQPGDDAVGGDETTTGKGSNNKDKGVAVTSSDSDIVSGPD 58

Query: 275 SDY--EDEEFGGHLLLDLNQGPTLIINVSDGEDNASDLSDGSEPLXXXXXXXXXXXXXX- 445
           SDY  EDEEFG   L DLNQ P   I+VS GED ASD SDG +                 
Sbjct: 59  SDYDFEDEEFGRGSLPDLNQDPFSSISVSSGEDYASDSSDGGKTSSKRGKTLLSRGKRKS 118

Query: 446 LNVKNGEPSDVERTVEHEDEEYSMVFCQE--APINLXXXXXXXXXXXXXXXDSQTVLLWN 619
            N + G+PSDV R  E+++++      Q+   P                  DS+ VLLWN
Sbjct: 119 FNTEYGDPSDVVRVAEYKEDDAQFAMFQQLSVPSVSKGTKKRKYSRKGRKGDSKPVLLWN 178

Query: 620 AWEEEQERWIDENLSEDVSLDHQSEVM 700
           AWEEEQE+WID ++ EDV  DHQSEVM
Sbjct: 179 AWEEEQEKWIDRHMLEDVDSDHQSEVM 205


>ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 924

 Score =  122 bits (307), Expect = 5e-26
 Identities = 87/207 (42%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
 Frame = +2

Query: 119 MLLRPRRRRSDTMVSEAGKEKQPSDAI--EEVEIDGLCSNGTDE--------DDNDAPSK 268
           M LR RRR S+  VS  GKE+ P D    E+    G  SN  D+         D  +   
Sbjct: 1   MELRSRRRLSNPSVS--GKEQPPGDDAVGEDETTTGKGSNNKDKGVAVISSNSDIVSGPD 58

Query: 269 LDSDYEDEEFGGHLLLDLNQGPTLIINVSDGEDNASDLSDGSEPLXXXXXXXXXXXXXX- 445
            DSDYEDEEFG   L DLNQ P+ I + S GED ASD SDG + L               
Sbjct: 59  SDSDYEDEEFGVGSLPDLNQDPSSI-SFSSGEDYASDSSDGGKSLYKRGKALLSRGKRKS 117

Query: 446 LNVKNGEPSDVERTVEHEDEEYSMVFCQE--APINLXXXXXXXXXXXXXXXDSQTVLLWN 619
            N + GEPSDV R  E++D++      QE   P                  DS++VLLWN
Sbjct: 118 FNTEYGEPSDVVRVAEYKDDDAQFAIFQELSVPSVSKGTKRRKYSRKGRKGDSKSVLLWN 177

Query: 620 AWEEEQERWIDENLSEDVSLDHQSEVM 700
           AWEEEQE+WID ++ EDV LD+ SEVM
Sbjct: 178 AWEEEQEKWIDRHMLEDVDLDNHSEVM 204


>ref|XP_003605955.1| DNA repair protein RAD5 [Medicago truncatula]
           gi|355507010|gb|AES88152.1| DNA repair protein RAD5
           [Medicago truncatula]
          Length = 935

 Score =  120 bits (301), Expect = 3e-25
 Identities = 87/231 (37%), Positives = 111/231 (48%), Gaps = 37/231 (16%)
 Frame = +2

Query: 119 MLLRPRRRR-SDTMVSEAGKEKQPSDAIEEVEIDGLCSNGTDEDDNDAPSKLDSDYEDEE 295
           M LR RR+R SD + S   K KQP +     +ID      TDEDD+ A  K DSDYE EE
Sbjct: 1   MELRSRRQRASDEIDSVTDKGKQPME-----DIDEKFDFNTDEDDHVASVKCDSDYEAEE 55

Query: 296 FGGHLLLDLNQGPTLIINVSDGEDNASDLSDGSEPLXXXXXXXXXXXXXXLNVKNGEPSD 475
            GG L  DLN+ PT+II+ SDGEDN SD SD S P                 +++ + S 
Sbjct: 56  IGGQLPFDLNRDPTIIISDSDGEDNTSDSSDFSGPSSKRRKTRSRKRGSKSKIESADLSG 115

Query: 476 VERT----------------------------------VEHEDEEYSMVFCQEAPIN--L 547
           VE                                    +E +DE + MV  +EAP +  L
Sbjct: 116 VESALEFDLSGVERALEFDQSCVERALEFDLSGVERALLEFDDELFPMVSAEEAPFDLPL 175

Query: 548 XXXXXXXXXXXXXXXDSQTVLLWNAWEEEQERWIDENLSEDVSLDHQSEVM 700
                          D + VLLW+AW++E E+WID+NL EDV+LD QSEVM
Sbjct: 176 PKLPRKKKAKKTKKGDPKPVLLWHAWKQEHEKWIDQNLLEDVTLD-QSEVM 225


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