BLASTX nr result

ID: Glycyrrhiza23_contig00031007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031007
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615479.1| MutS2 protein [Medicago truncatula] gi|35551...   122   2e-26
ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]       117   7e-25
ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]     89   3e-16
emb|CBI23113.3| unnamed protein product [Vitis vinifera]               89   3e-16
ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|XP_003615479.1| MutS2 protein [Medicago truncatula] gi|355516814|gb|AES98437.1|
           MutS2 protein [Medicago truncatula]
          Length = 233

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/82 (78%), Positives = 69/82 (84%)
 Frame = +3

Query: 3   DMEKLKQDYQELLAEANHYLMQSRELHSSLLDTRRKIMGHSASLRFKKMRDVSGAAATAR 182
           DMEKLKQDYQ LL EA+HYLMQSR LH SLL TRRKI  HS SLR KK+RDVS AAA +R
Sbjct: 49  DMEKLKQDYQRLLTEADHYLMQSRGLHGSLLKTRRKIAEHSTSLRLKKLRDVSEAAAMSR 108

Query: 183 SILHKKVRELVASAKQMSQHNK 248
           SILHKKVREL ASAK+ SQH+K
Sbjct: 109 SILHKKVRELDASAKKTSQHDK 130


>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/82 (75%), Positives = 71/82 (86%)
 Frame = +3

Query: 3   DMEKLKQDYQELLAEANHYLMQSRELHSSLLDTRRKIMGHSASLRFKKMRDVSGAAATAR 182
           DME+LKQ+YQELL EA HYL  SR L++SLL+TRRKI+ +S +LRFKKMRDVS AAA AR
Sbjct: 619 DMERLKQEYQELLDEARHYLRHSRGLYNSLLNTRRKIIEYSTNLRFKKMRDVSEAAAMAR 678

Query: 183 SILHKKVRELVASAKQMSQHNK 248
           SILHKKVREL ASAKQ SQ+NK
Sbjct: 679 SILHKKVRELDASAKQPSQNNK 700


>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/79 (55%), Positives = 62/79 (78%)
 Frame = +3

Query: 3   DMEKLKQDYQELLAEANHYLMQSRELHSSLLDTRRKIMGHSASLRFKKMRDVSGAAATAR 182
           DME+ KQ++QE + +A +YLM SR+L+ +LL T+RK+M H  + R+ KMR+VS AAA AR
Sbjct: 619 DMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVAR 678

Query: 183 SILHKKVRELVASAKQMSQ 239
           S+LHKKVR+L +SA + SQ
Sbjct: 679 SLLHKKVRQLRSSATRPSQ 697


>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/79 (55%), Positives = 62/79 (78%)
 Frame = +3

Query: 3   DMEKLKQDYQELLAEANHYLMQSRELHSSLLDTRRKIMGHSASLRFKKMRDVSGAAATAR 182
           DME+ KQ++QE + +A +YLM SR+L+ +LL T+RK+M H  + R+ KMR+VS AAA AR
Sbjct: 635 DMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVAR 694

Query: 183 SILHKKVRELVASAKQMSQ 239
           S+LHKKVR+L +SA + SQ
Sbjct: 695 SLLHKKVRQLRSSATRPSQ 713


>ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|222858522|gb|EEE96069.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/79 (58%), Positives = 54/79 (68%)
 Frame = +3

Query: 3   DMEKLKQDYQELLAEANHYLMQSRELHSSLLDTRRKIMGHSASLRFKKMRDVSGAAATAR 182
           DME+ KQD QELL EA H+LM S+ LH  L   RRKI  H    R++KMR +S AA+ AR
Sbjct: 694 DMERFKQDSQELLHEARHHLMLSKNLHEKLKLARRKIKEHGTEQRYRKMRQISEAASMAR 753

Query: 183 SILHKKVRELVASAKQMSQ 239
           SILHKKVR+L A A Q  Q
Sbjct: 754 SILHKKVRQLRAHATQTFQ 772


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