BLASTX nr result

ID: Glycyrrhiza23_contig00030975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030975
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516856.1| PREDICTED: transcription factor bHLH30-like ...    84   1e-14
ref|XP_003591832.1| Transcription factor bHLH30 [Medicago trunca...    81   1e-13
ref|XP_002315961.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002524402.1| DNA binding protein, putative [Ricinus commu...    76   3e-12
emb|CBI27073.3| unnamed protein product [Vitis vinifera]               74   2e-11

>ref|XP_003516856.1| PREDICTED: transcription factor bHLH30-like [Glycine max]
          Length = 376

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 62/137 (45%), Positives = 74/137 (54%), Gaps = 13/137 (9%)
 Frame = -3

Query: 372 GFNNNNMLFPSGEVSPMLQVQPWSMPMPPVHPFNNHIDPFVNI------------IXXXX 229
           G  +  ++FP  EVSP LQ Q WSMP  PVH FN++   ++N                  
Sbjct: 43  GGASRGLMFPP-EVSPTLQQQSWSMP--PVHSFNSNPVHYINNNNTNPVHHHHEQAPFLV 99

Query: 228 XXXXXSVPYANLFNRRVNVPNSLQFAYXXXXXXXXXXXHLRILSDTLQHGCS-AAAAPFG 52
                  PYA+ F+ R  VP SLQFAY           HLRI+SDTL       +AAPFG
Sbjct: 100 PPPTTPSPYASFFSSRRVVP-SLQFAYEGPSSHLDHHHHLRIISDTLGPMVQPGSAAPFG 158

Query: 51  LQAELGKMSAQEIMEAK 1
           LQAELGKM+AQEIMEAK
Sbjct: 159 LQAELGKMTAQEIMEAK 175


>ref|XP_003591832.1| Transcription factor bHLH30 [Medicago truncatula]
           gi|355480880|gb|AES62083.1| Transcription factor bHLH30
           [Medicago truncatula]
          Length = 338

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 63/131 (48%), Positives = 73/131 (55%), Gaps = 8/131 (6%)
 Frame = -3

Query: 369 FNNNNMLFPSG-----EVSPMLQVQPWSMPM--PPVHPFNNHIDPFVNIIXXXXXXXXXS 211
           F     +FP+      +VSP+LQ Q WSM       HPFN H DPFV            +
Sbjct: 42  FGGGRSMFPTAGGDHNQVSPILQ-QTWSMQQLHHHHHPFNPH-DPFV-------IPQQQA 92

Query: 210 VPYANLFNRRVNVPNSLQFAYXXXXXXXXXXXHLRILSDTLQHGCSAAAAPFG-LQAELG 34
            PYA+LFNRRV    SLQFAY            LRI+SDTLQHG  + + PFG  Q E+G
Sbjct: 93  SPYASLFNRRVP---SLQFAYDHHAGSEH----LRIISDTLQHG--SGSGPFGGFQGEVG 143

Query: 33  KMSAQEIMEAK 1
           KMSAQEIMEAK
Sbjct: 144 KMSAQEIMEAK 154


>ref|XP_002315961.1| predicted protein [Populus trichocarpa] gi|222865001|gb|EEF02132.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 58/127 (45%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
 Frame = -3

Query: 372 GFNNNNMLFPSGEVSPMLQVQPWSMPMPPVHPFNN-HIDPFVNIIXXXXXXXXXSVP--Y 202
           G   +  +FP  EVSP+L   PW  P+PPVH FN  H  P   +           VP  Y
Sbjct: 48  GARGSGFIFP--EVSPIL---PW--PLPPVHSFNPAHFTPNHPVRDHDPFLIPPPVPSSY 100

Query: 201 ANLFNRRVNVPNSLQFAYXXXXXXXXXXXHLRILSDTLQHGCSAAAAPFGLQAELGKMSA 22
             LFNRR     SLQFAY            LRI+SDTL       +APFGLQAEL KM+A
Sbjct: 101 GGLFNRRAP---SLQFAYDGTPSDH-----LRIISDTLGPVVQPGSAPFGLQAELSKMTA 152

Query: 21  QEIMEAK 1
           QEIM+AK
Sbjct: 153 QEIMDAK 159


>ref|XP_002524402.1| DNA binding protein, putative [Ricinus communis]
           gi|223536363|gb|EEF38013.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 367

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 59/141 (41%), Positives = 73/141 (51%), Gaps = 20/141 (14%)
 Frame = -3

Query: 363 NNNMLFPSGEVSPMLQVQPWSMPMPPVHPFN------------------NHIDPFVNIIX 238
           ++ ++FP  EVSP+L   PW  P+PPVH FN                  +H DPF+    
Sbjct: 50  SSGLIFP--EVSPIL---PW--PLPPVHSFNPAMTQFPSNQVHHHHHHRDHHDPFL---- 98

Query: 237 XXXXXXXXSVP--YANLFNRRVNVPNSLQFAYXXXXXXXXXXXHLRILSDTLQHGCSAAA 64
                    VP  Y NLFNRR     +LQFAY            LRI++DTL       +
Sbjct: 99  -----IPPPVPSSYGNLFNRRAP---ALQFAYDGSSSHDH----LRIITDTLGPVVQPGS 146

Query: 63  APFGLQAELGKMSAQEIMEAK 1
           APFGLQAELGKM+AQEIM+AK
Sbjct: 147 APFGLQAELGKMTAQEIMDAK 167


>emb|CBI27073.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 60/137 (43%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
 Frame = -3

Query: 381 GRSGFNNNNMLFPSGEVSPMLQVQPWSMPMPPVHPFN----------NHIDPFVNIIXXX 232
           GRSG     ++FP  EVSP+LQ  PWS P  PVH FN          +H DPF+      
Sbjct: 14  GRSG-----LIFP--EVSPILQ--PWSFP--PVHAFNPAHFAANPVRDH-DPFL------ 55

Query: 231 XXXXXXSVPYANLFNRRVNVPNSLQFAYXXXXXXXXXXXHLRILSDTLQHGCSAAAAPFG 52
                    Y ++FNRR     +LQFAY            LRI+SDTL       ++PFG
Sbjct: 56  --VPPPPSAYGSVFNRRAP---ALQFAYEGPSSEH-----LRIISDTLGPVVQPGSSPFG 105

Query: 51  LQAELGKMSAQEIMEAK 1
           LQAELGKM+AQEIM+AK
Sbjct: 106 LQAELGKMTAQEIMDAK 122


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