BLASTX nr result
ID: Glycyrrhiza23_contig00030971
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00030971
(272 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003611431.1| Pentatricopeptide repeat-containing protein ... 150 1e-34
ref|XP_002528772.1| pentatricopeptide repeat-containing protein,... 141 6e-32
ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containi... 129 2e-28
ref|XP_002329533.1| predicted protein [Populus trichocarpa] gi|2... 127 1e-27
emb|CBI37206.3| unnamed protein product [Vitis vinifera] 121 5e-26
>ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512766|gb|AES94389.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 735
Score = 150 bits (378), Expect = 1e-34
Identities = 69/89 (77%), Positives = 79/89 (88%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
NAMI G+ ENGRMD+A+ LFDQ+ECRNV+T TSMISGYCRVG++ EA+ LF+IMPE NVV
Sbjct: 200 NAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVV 259
Query: 88 SWTAMIGGFAWNGFYEEAVFLFLQMMTLS 2
SWTAMIGGFAWNGFY EA+ LFL MMTLS
Sbjct: 260 SWTAMIGGFAWNGFYREALLLFLDMMTLS 288
Score = 78.6 bits (192), Expect = 5e-13
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVVS 86
AM+SG+A G +D+AR +FD+M RNVV+ SM+ G R G+LEEA +F P+ NVVS
Sbjct: 139 AMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVS 198
Query: 85 WTAMIGGFAWNGFYEEAVFLFLQM 14
W AMI G+ NG ++A LF Q+
Sbjct: 199 WNAMIEGYVENGRMDDAKDLFDQI 222
Score = 74.3 bits (181), Expect = 9e-12
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
NAM+S + ++G +A+ FD M RNVV+ T+M+SGY +G +++A +F MPE NVV
Sbjct: 107 NAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVV 166
Query: 88 SWTAMIGGFAWNGFYEEAVFLF 23
SW +M+ G NG EEA +F
Sbjct: 167 SWNSMVVGLIRNGDLEEARKVF 188
Score = 72.8 bits (177), Expect = 3e-11
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVVS 86
+M++ +A++G +++AR LFD M RN+VT +M+S Y + G +A F MPE NVVS
Sbjct: 77 SMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNVVS 136
Query: 85 WTAMIGGFAWNGFYEEAVFLFLQM 14
WTAM+ G+A G+ ++A +F +M
Sbjct: 137 WTAMLSGYAGLGWIDDARKVFDEM 160
Score = 69.3 bits (168), Expect = 3e-10
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEI--N 95
N+MI+G+ + G++ +A+ LFD + RN + T MISGY G++ +A +LF MP+ +
Sbjct: 368 NSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKD 427
Query: 94 VVSWTAMIGGFAWNGFYEEAVFLFLQMM 11
++WT MI G+ N EA+ LF +MM
Sbjct: 428 SIAWTLMIYGYVQNELIAEAINLFAEMM 455
>ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531775|gb|EEF33594.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 676
Score = 141 bits (355), Expect = 6e-32
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
N MI+G+AENGRM+EARALFD+ME RNV+T TSM+SGYCR GE+EE Y LFR MP+ N+V
Sbjct: 138 NGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIV 197
Query: 88 SWTAMIGGFAWNGFYEEAVFLFLQM 14
SWTAMIGGF WNGFYE+A+ LFL+M
Sbjct: 198 SWTAMIGGFTWNGFYEDALLLFLEM 222
Score = 83.6 bits (205), Expect = 2e-14
Identities = 41/87 (47%), Positives = 56/87 (64%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
N MI+G+ G +D+A+ LFD M R+ +T TSMI GY +G + EA SLF MPE + V
Sbjct: 306 NYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMPEKDAV 365
Query: 88 SWTAMIGGFAWNGFYEEAVFLFLQMMT 8
+WT MI G N + EA +LF +M+T
Sbjct: 366 AWTTMISGHVRNELFAEATYLFSEMLT 392
Score = 76.6 bits (187), Expect = 2e-12
Identities = 41/82 (50%), Positives = 53/82 (64%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
NA++SG + GR+ EA LF++M RNVV+ TSM+ G G++ EA SLF MP+ NVV
Sbjct: 45 NALLSGLLQCGRLSEAMKLFEEMPERNVVSWTSMLCGLADAGKICEAKSLFEEMPDRNVV 104
Query: 88 SWTAMIGGFAWNGFYEEAVFLF 23
SW AMI G NG E A +F
Sbjct: 105 SWNAMIVGLIRNGDLEAARMVF 126
Score = 73.2 bits (178), Expect = 2e-11
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVVS 86
+++S ++ +G +DEARALFD M RN V+ +++SG + G L EA LF MPE NVVS
Sbjct: 15 SLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPERNVVS 74
Query: 85 WTAMIGGFAWNGFYEEAVFLFLQM 14
WT+M+ G A G EA LF +M
Sbjct: 75 WTSMLCGLADAGKICEAKSLFEEM 98
Score = 70.9 bits (172), Expect = 1e-10
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVVS 86
+M+ G A+ G++ EA++LF++M RNVV+ +MI G R G+LE A +F P N S
Sbjct: 77 SMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLEAARMVFDESPVKNAAS 136
Query: 85 WTAMIGGFAWNGFYEEAVFLFLQM 14
W MI G+A NG EEA LF +M
Sbjct: 137 WNGMIAGYAENGRMEEARALFDEM 160
>ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Vitis vinifera]
Length = 743
Score = 129 bits (325), Expect = 2e-28
Identities = 61/85 (71%), Positives = 71/85 (83%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
N MI+G+AE+ RM+EAR LFD M RNVVT TSMISGYCR G ++E Y LF+ MPE NVV
Sbjct: 204 NVMIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVV 263
Query: 88 SWTAMIGGFAWNGFYEEAVFLFLQM 14
SWTAMIGGFAWNGFY+EA+ LFL+M
Sbjct: 264 SWTAMIGGFAWNGFYKEALLLFLEM 288
Score = 77.0 bits (188), Expect = 1e-12
Identities = 34/85 (40%), Positives = 58/85 (68%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
N+MI+G+ G++++A++LFD + R+ ++ TSMI+GY VG++ +A LF MP+ + V
Sbjct: 372 NSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDRDAV 431
Query: 88 SWTAMIGGFAWNGFYEEAVFLFLQM 14
+WT M+ G N + EA +LF +M
Sbjct: 432 AWTVMVSGHVQNELFAEATYLFSEM 456
Score = 76.6 bits (187), Expect = 2e-12
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
NAM+SG+ + GR+ +A F++M RNVV+ TS++ G G + EA LF +MPE NVV
Sbjct: 111 NAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVV 170
Query: 88 SWTAMIGGFAWNGFYEEAVFLFLQM 14
SW +M+ G +G EEA +F +M
Sbjct: 171 SWNSMLVGLIRSGQLEEARRVFNEM 195
Score = 76.3 bits (186), Expect = 2e-12
Identities = 41/81 (50%), Positives = 55/81 (67%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVVS 86
+++S F++NG +DEARALF+ M RNVVT +M+SGY + G L +A F MPE NVVS
Sbjct: 81 SLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVS 140
Query: 85 WTAMIGGFAWNGFYEEAVFLF 23
WT+++ G A G EA LF
Sbjct: 141 WTSLLCGLANAGRIGEARELF 161
Score = 68.9 bits (167), Expect = 4e-10
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVVS 86
+++ G A GR+ EAR LF+ M RNVV+ SM+ G R G+LEEA +F MP + VS
Sbjct: 143 SLLCGLANAGRIGEARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVS 202
Query: 85 WTAMIGGFAWNGFYEEAVFLF 23
W MI G+A + EEA LF
Sbjct: 203 WNVMIAGYAEHSRMEEARVLF 223
>ref|XP_002329533.1| predicted protein [Populus trichocarpa] gi|222870242|gb|EEF07373.1|
predicted protein [Populus trichocarpa]
Length = 693
Score = 127 bits (318), Expect = 1e-27
Identities = 57/85 (67%), Positives = 71/85 (83%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
NAMI GFAENG+M+EAR LF++ME RNV+T T+MI+GYCR+G++ EAY F +PE NVV
Sbjct: 161 NAMIKGFAENGKMEEARVLFEEMEDRNVITWTTMIAGYCRIGDVREAYCFFCRIPERNVV 220
Query: 88 SWTAMIGGFAWNGFYEEAVFLFLQM 14
SWTAMI GF WNG+Y EA+ LFL+M
Sbjct: 221 SWTAMISGFTWNGYYGEALLLFLEM 245
Score = 79.0 bits (193), Expect = 4e-13
Identities = 41/82 (50%), Positives = 53/82 (64%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
N M+SG+ + GR+ EAR LF++M RNVV+ TSM+ G G + EA LF+ MPE NVV
Sbjct: 68 NVMLSGYLQCGRLSEARGLFEEMPERNVVSWTSMLCGLADAGRICEARELFKEMPERNVV 127
Query: 88 SWTAMIGGFAWNGFYEEAVFLF 23
SW AM+ G N EEA +F
Sbjct: 128 SWNAMVAGLIKNEDLEEARRVF 149
Score = 79.0 bits (193), Expect = 4e-13
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVVS 86
+M+ G A+ GR+ EAR LF +M RNVV+ +M++G + +LEEA +F +PE NVVS
Sbjct: 100 SMLCGLADAGRICEARELFKEMPERNVVSWNAMVAGLIKNEDLEEARRVFDEIPEKNVVS 159
Query: 85 WTAMIGGFAWNGFYEEAVFLFLQM 14
W AMI GFA NG EEA LF +M
Sbjct: 160 WNAMIKGFAENGKMEEARVLFEEM 183
Score = 71.6 bits (174), Expect = 6e-11
Identities = 35/86 (40%), Positives = 54/86 (62%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
N MI+G+ G++++AR LFD + R+ +T TSMI GY +G + EA LF MP+ + V
Sbjct: 329 NHMINGYTRIGQVEKARELFDTIPARDNITWTSMIVGYFDIGNVSEACYLFENMPDKDSV 388
Query: 88 SWTAMIGGFAWNGFYEEAVFLFLQMM 11
+WT+MI G N + +A L+M+
Sbjct: 389 AWTSMISGLVQNELFLKATSFLLRML 414
Score = 71.2 bits (173), Expect = 8e-11
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVVS 86
++++ ++ G +DE+R LFD M RN+V+ M+SGY + G L EA LF MPE NVVS
Sbjct: 38 SLLTKYSRIGFIDESRVLFDIMPERNIVSYNVMLSGYLQCGRLSEARGLFEEMPERNVVS 97
Query: 85 WTAMIGGFAWNGFYEEAVFLFLQM 14
WT+M+ G A G EA LF +M
Sbjct: 98 WTSMLCGLADAGRICEARELFKEM 121
>emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 121 bits (304), Expect = 5e-26
Identities = 57/79 (72%), Positives = 66/79 (83%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
N MI+G+AE+ RM+EAR LFD M RNVVT TSMISGYCR G ++E Y LF+ MPE NVV
Sbjct: 204 NVMIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVV 263
Query: 88 SWTAMIGGFAWNGFYEEAV 32
SWTAMIGGFAWNGFY+EA+
Sbjct: 264 SWTAMIGGFAWNGFYKEAL 282
Score = 77.0 bits (188), Expect = 1e-12
Identities = 34/85 (40%), Positives = 58/85 (68%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
N+MI+G+ G++++A++LFD + R+ ++ TSMI+GY VG++ +A LF MP+ + V
Sbjct: 293 NSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDRDAV 352
Query: 88 SWTAMIGGFAWNGFYEEAVFLFLQM 14
+WT M+ G N + EA +LF +M
Sbjct: 353 AWTVMVSGHVQNELFAEATYLFSEM 377
Score = 76.6 bits (187), Expect = 2e-12
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = -2
Query: 268 NAMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVV 89
NAM+SG+ + GR+ +A F++M RNVV+ TS++ G G + EA LF +MPE NVV
Sbjct: 111 NAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVV 170
Query: 88 SWTAMIGGFAWNGFYEEAVFLFLQM 14
SW +M+ G +G EEA +F +M
Sbjct: 171 SWNSMLVGLIRSGQLEEARRVFNEM 195
Score = 76.3 bits (186), Expect = 2e-12
Identities = 41/81 (50%), Positives = 55/81 (67%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVVS 86
+++S F++NG +DEARALF+ M RNVVT +M+SGY + G L +A F MPE NVVS
Sbjct: 81 SLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVS 140
Query: 85 WTAMIGGFAWNGFYEEAVFLF 23
WT+++ G A G EA LF
Sbjct: 141 WTSLLCGLANAGRIGEARELF 161
Score = 68.9 bits (167), Expect = 4e-10
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGTSMISGYCRVGELEEAYSLFRIMPEINVVS 86
+++ G A GR+ EAR LF+ M RNVV+ SM+ G R G+LEEA +F MP + VS
Sbjct: 143 SLLCGLANAGRIGEARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVS 202
Query: 85 WTAMIGGFAWNGFYEEAVFLF 23
W MI G+A + EEA LF
Sbjct: 203 WNVMIAGYAEHSRMEEARVLF 223
Score = 61.6 bits (148), Expect = 6e-08
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 27/111 (24%)
Frame = -2
Query: 265 AMISGFAENGRMDEARALFDQMECRNVVTGT---------------------------SM 167
+MISG+ G + E LF +M RNVV+ T SM
Sbjct: 236 SMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALNSMSYNTQSCNSM 295
Query: 166 ISGYCRVGELEEAYSLFRIMPEINVVSWTAMIGGFAWNGFYEEAVFLFLQM 14
I+GY R+G+LE+A SLF +P + +SWT+MI G+ G +A +LF M
Sbjct: 296 INGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNM 346