BLASTX nr result
ID: Glycyrrhiza23_contig00030934
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00030934
(305 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago ... 137 7e-31
ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat... 114 6e-24
emb|CBI19634.3| unnamed protein product [Vitis vinifera] 114 6e-24
emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera] 114 6e-24
ref|XP_002510334.1| pentatricopeptide repeat-containing protein,... 110 9e-23
>ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein
MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 137 bits (346), Expect = 7e-31
Identities = 68/101 (67%), Positives = 81/101 (80%)
Frame = -3
Query: 303 MTRHALHMFDEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYM 124
MT+HAL++FDEM R+ R P LRSC+ LL KLV KGE A+MVF+QI GI PDVYM
Sbjct: 171 MTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIV--PDVYM 228
Query: 123 CSIVVNALCQVGRVDDAVGLLEEMVRKGLEPNVVTYNALIN 1
CSIVVNA CQVGRVD A+ +LE+MV++GLEPNVVTYN L+N
Sbjct: 229 CSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVN 269
>ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 114 bits (286), Expect = 6e-24
Identities = 55/101 (54%), Positives = 78/101 (77%)
Frame = -3
Query: 303 MTRHALHMFDEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYM 124
+T++AL++FD MG+ R PSLRSCNSLL LV GE+ TA V++Q+ R+GI PDV+M
Sbjct: 171 LTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGI--VPDVFM 228
Query: 123 CSIVVNALCQVGRVDDAVGLLEEMVRKGLEPNVVTYNALIN 1
SI+VNA C+ G+VD+A G +++M G+EPN+VTY++LIN
Sbjct: 229 VSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269
Score = 57.4 bits (137), Expect = 1e-06
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = -3
Query: 291 ALHMFDEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYMCSIV 112
A+ + DEM RL +L CNSL+ +GE A V ++ + PD Y + +
Sbjct: 351 AVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLK--PDSYSYNTL 408
Query: 111 VNALCQVGRVDDAVGLLEEMVRKGLEPNVVTYNALI 4
++ C+ G +A L ++M+++G+EP V+TYN L+
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 444
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/97 (30%), Positives = 56/97 (57%)
Frame = -3
Query: 291 ALHMFDEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYMCSIV 112
A + DEM R P++ + N+L+ L A +F ++ + G+ P+V + +
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF--PNVVTYNTL 825
Query: 111 VNALCQVGRVDDAVGLLEEMVRKGLEPNVVTYNALIN 1
++ C++G +D A L ++M+ +G+ P+VVTY+ALIN
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALIN 862
>emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 114 bits (286), Expect = 6e-24
Identities = 55/101 (54%), Positives = 78/101 (77%)
Frame = -3
Query: 303 MTRHALHMFDEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYM 124
+T++AL++FD MG+ R PSLRSCNSLL LV GE+ TA V++Q+ R+GI PDV+M
Sbjct: 137 LTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGI--VPDVFM 194
Query: 123 CSIVVNALCQVGRVDDAVGLLEEMVRKGLEPNVVTYNALIN 1
SI+VNA C+ G+VD+A G +++M G+EPN+VTY++LIN
Sbjct: 195 VSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 235
Score = 57.4 bits (137), Expect = 1e-06
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = -3
Query: 291 ALHMFDEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYMCSIV 112
A+ + DEM RL +L CNSL+ +GE A V ++ + PD Y + +
Sbjct: 317 AVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLK--PDSYSYNTL 374
Query: 111 VNALCQVGRVDDAVGLLEEMVRKGLEPNVVTYNALI 4
++ C+ G +A L ++M+++G+EP V+TYN L+
Sbjct: 375 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 410
>emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 114 bits (286), Expect = 6e-24
Identities = 55/101 (54%), Positives = 78/101 (77%)
Frame = -3
Query: 303 MTRHALHMFDEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYM 124
+T++AL++FD MG+ R PSLRSCNSLL LV GE+ TA V++Q+ R+GI PDV+M
Sbjct: 171 LTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGI--VPDVFM 228
Query: 123 CSIVVNALCQVGRVDDAVGLLEEMVRKGLEPNVVTYNALIN 1
SI+VNA C+ G+VD+A G +++M G+EPN+VTY++LIN
Sbjct: 229 VSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269
Score = 57.4 bits (137), Expect = 1e-06
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = -3
Query: 291 ALHMFDEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYMCSIV 112
A+ + DEM RL +L CNSL+ +GE A V ++ + PD Y + +
Sbjct: 351 AVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLK--PDSYSYNTL 408
Query: 111 VNALCQVGRVDDAVGLLEEMVRKGLEPNVVTYNALI 4
++ C+ G +A L ++M+++G+EP V+TYN L+
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLL 444
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/97 (30%), Positives = 56/97 (57%)
Frame = -3
Query: 291 ALHMFDEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYMCSIV 112
A + DEM R P++ + N+L+ L A +F ++ + G+ P+V + +
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF--PNVVTYNTL 825
Query: 111 VNALCQVGRVDDAVGLLEEMVRKGLEPNVVTYNALIN 1
++ C++G +D A L ++M+ +G+ P+VVTY+ALIN
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALIN 862
>ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551035|gb|EEF52521.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 947
Score = 110 bits (276), Expect = 9e-23
Identities = 58/101 (57%), Positives = 75/101 (74%)
Frame = -3
Query: 303 MTRHALHMFDEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYM 124
M ++ALH+FD MG+L PSLRSCN LL+ LV KGES+ AI+V++ I RLGI PDV+
Sbjct: 163 MIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGI--VPDVFT 220
Query: 123 CSIVVNALCQVGRVDDAVGLLEEMVRKGLEPNVVTYNALIN 1
CSI+VNA C+ G V+ AV ++EM G E NVVTYN+LI+
Sbjct: 221 CSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLID 261
Score = 55.1 bits (131), Expect = 6e-06
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = -3
Query: 276 DEMGRLSRTPSLRSCNSLLAKLVSKGESTTAIMVFEQIARLGIAATPDVYMCSIVVNALC 97
DE + P+ N +A L G+ A +F + G + PD + +++
Sbjct: 698 DESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFS--PDNFTYCTLIHGYS 755
Query: 96 QVGRVDDAVGLLEEMVRKGLEPNVVTYNALIN 1
G V+DA L +EM+++GL PN++TYNALIN
Sbjct: 756 AAGNVNDAFSLRDEMLKRGLAPNIITYNALIN 787