BLASTX nr result

ID: Glycyrrhiza23_contig00030896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030896
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550385.1| PREDICTED: tubby-like F-box protein 5-like [...   305   8e-81
ref|XP_003544406.1| PREDICTED: tubby-like F-box protein 5-like [...   305   1e-80
ref|XP_003589399.1| Tubby-like F-box protein [Medicago truncatul...   271   2e-70
emb|CBI19713.3| unnamed protein product [Vitis vinifera]              248   1e-63
ref|XP_002282152.1| PREDICTED: tubby-like F-box protein 5 isofor...   248   1e-63

>ref|XP_003550385.1| PREDICTED: tubby-like F-box protein 5-like [Glycine max]
          Length = 436

 Score =  305 bits (781), Expect = 8e-81
 Identities = 161/228 (70%), Positives = 174/228 (76%)
 Frame = +3

Query: 141 MAFKSIVRELKEMGEGIGNMYRRGGGEAKPIMHHRHGKSHIAPECSXXXXXXXXXXXXXX 320
           M F+SIVRELKE+GEGI NMYRRGG EAK +  HRHGKSHIAPECS              
Sbjct: 1   MPFRSIVRELKEIGEGISNMYRRGG-EAKHV--HRHGKSHIAPECSLPPPPSSSSSSSSS 57

Query: 321 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWANLPPELLLDIIQRVEASETSWPARRA 500
                                          RWANLPPELLLDIIQR+EASETSWPARRA
Sbjct: 58  SSWQS--------------------------RWANLPPELLLDIIQRLEASETSWPARRA 91

Query: 501 LVACASVCRLWREITKDVVKTPEQCGWLTFPISLKQPGPRDNPIQCFIKRERVTSTYRLY 680
           LVACASVC+LWREITKDVVKTPEQCG++TFPISLKQPGPRD+PIQCFI+RER+TSTY LY
Sbjct: 92  LVACASVCKLWREITKDVVKTPEQCGFITFPISLKQPGPRDSPIQCFIRRERMTSTYCLY 151

Query: 681 LGLSPALSGDMGKLLLAAKKIRRATCTEFLISLVADDFSKASNTYIGK 824
           LGLSPALSGDM KLLLAAKKIRRATCTEF+ISLV+DDFS ASNTY+GK
Sbjct: 152 LGLSPALSGDMSKLLLAAKKIRRATCTEFIISLVSDDFSWASNTYVGK 199


>ref|XP_003544406.1| PREDICTED: tubby-like F-box protein 5-like [Glycine max]
          Length = 423

 Score =  305 bits (780), Expect = 1e-80
 Identities = 161/228 (70%), Positives = 173/228 (75%)
 Frame = +3

Query: 141 MAFKSIVRELKEMGEGIGNMYRRGGGEAKPIMHHRHGKSHIAPECSXXXXXXXXXXXXXX 320
           M F+SIVRELKE+GEGI NMYRRGG EAK +  HRHGKSHIAPECS              
Sbjct: 1   MPFRSIVRELKEIGEGISNMYRRGG-EAKHV--HRHGKSHIAPECSLPPPPPPPPSSSSQ 57

Query: 321 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWANLPPELLLDIIQRVEASETSWPARRA 500
                                          RWANLPPELLLDIIQR+EASETSWPARRA
Sbjct: 58  S------------------------------RWANLPPELLLDIIQRLEASETSWPARRA 87

Query: 501 LVACASVCRLWREITKDVVKTPEQCGWLTFPISLKQPGPRDNPIQCFIKRERVTSTYRLY 680
           LVACASVCRLWREITKDV+KTPEQCG LTFPISLKQPGPRD+PIQCFI+RER+TSTY LY
Sbjct: 88  LVACASVCRLWREITKDVIKTPEQCGLLTFPISLKQPGPRDSPIQCFIRRERMTSTYCLY 147

Query: 681 LGLSPALSGDMGKLLLAAKKIRRATCTEFLISLVADDFSKASNTYIGK 824
           LGLSPALSGDM KLLLAAKKIRRATCTEF+ISLVADDFS+A +TY+GK
Sbjct: 148 LGLSPALSGDMSKLLLAAKKIRRATCTEFIISLVADDFSRACDTYVGK 195


>ref|XP_003589399.1| Tubby-like F-box protein [Medicago truncatula]
           gi|355478447|gb|AES59650.1| Tubby-like F-box protein
           [Medicago truncatula]
          Length = 224

 Score =  271 bits (692), Expect = 2e-70
 Identities = 149/230 (64%), Positives = 160/230 (69%), Gaps = 2/230 (0%)
 Frame = +3

Query: 141 MAFKSIVRELKEMGEGIGNMYRRGGGEAKPIMHHRHGKSHIAPECSXXXXXXXXXXXXXX 320
           M FKSIVRE+KEM EGIGNMY R   + +    HRHGKSHIAPECS              
Sbjct: 1   MPFKSIVREIKEMKEGIGNMYIR---DVETKHTHRHGKSHIAPECSSPISLSS------- 50

Query: 321 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWANLPPELLLDIIQRVEASETSWPARRA 500
                                          +WANLPPELLLDIIQRVEASET+WP+ RA
Sbjct: 51  -------------------------------QWANLPPELLLDIIQRVEASETTWPSLRA 79

Query: 501 LVACASVCRLWREITKDVVKTPEQCGWLTFPISLKQPGPRDNPIQCFIKRERVTSTYRLY 680
           LVACASVCRLWR+ITK VVKT EQCGW+TFPISLKQP PRDNPIQCFIKRER TSTY LY
Sbjct: 80  LVACASVCRLWRDITKGVVKTLEQCGWITFPISLKQPCPRDNPIQCFIKRERATSTYSLY 139

Query: 681 LGLSPA--LSGDMGKLLLAAKKIRRATCTEFLISLVADDFSKASNTYIGK 824
           LGLSP   L   M KLLLAAKKIRRATCT FLISLV+DDFS+A+NTYIGK
Sbjct: 140 LGLSPGKILFLVMSKLLLAAKKIRRATCTNFLISLVSDDFSRANNTYIGK 189


>emb|CBI19713.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  248 bits (633), Expect = 1e-63
 Identities = 133/228 (58%), Positives = 156/228 (68%)
 Frame = +3

Query: 141 MAFKSIVRELKEMGEGIGNMYRRGGGEAKPIMHHRHGKSHIAPECSXXXXXXXXXXXXXX 320
           M FKSIVREL++M + IGN  RR    A+    +R G+SHIAPE S              
Sbjct: 1   MHFKSIVRELRDMRDSIGNSSRR---RAEGKHTNRRGRSHIAPEGSPSSSALFQQQS--- 54

Query: 321 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWANLPPELLLDIIQRVEASETSWPARRA 500
                                          +WAN+PPELLLDIIQRVEA+E SWPARR 
Sbjct: 55  -------------------------------QWANMPPELLLDIIQRVEAAEASWPARRD 83

Query: 501 LVACASVCRLWREITKDVVKTPEQCGWLTFPISLKQPGPRDNPIQCFIKRERVTSTYRLY 680
           +V+C SVCR WR+ITK++VKTPEQCG LTFPISLKQPGPR++ IQCFIKRER TST+RLY
Sbjct: 84  VVSCGSVCRSWRDITKEIVKTPEQCGCLTFPISLKQPGPRESQIQCFIKRERATSTFRLY 143

Query: 681 LGLSPALSGDMGKLLLAAKKIRRATCTEFLISLVADDFSKASNTYIGK 824
           LGLSPALSGD  KLLLAA+KIRRAT TEF+ISL+ DDFS+A+N Y+GK
Sbjct: 144 LGLSPALSGDASKLLLAARKIRRATSTEFVISLLGDDFSRATNAYVGK 191


>ref|XP_002282152.1| PREDICTED: tubby-like F-box protein 5 isoform 1 [Vitis vinifera]
          Length = 416

 Score =  248 bits (633), Expect = 1e-63
 Identities = 133/228 (58%), Positives = 156/228 (68%)
 Frame = +3

Query: 141 MAFKSIVRELKEMGEGIGNMYRRGGGEAKPIMHHRHGKSHIAPECSXXXXXXXXXXXXXX 320
           M FKSIVREL++M + IGN  RR    A+    +R G+SHIAPE S              
Sbjct: 1   MHFKSIVRELRDMRDSIGNSSRR---RAEGKHTNRRGRSHIAPEGSPSSSALFQQQS--- 54

Query: 321 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWANLPPELLLDIIQRVEASETSWPARRA 500
                                          +WAN+PPELLLDIIQRVEA+E SWPARR 
Sbjct: 55  -------------------------------QWANMPPELLLDIIQRVEAAEASWPARRD 83

Query: 501 LVACASVCRLWREITKDVVKTPEQCGWLTFPISLKQPGPRDNPIQCFIKRERVTSTYRLY 680
           +V+C SVCR WR+ITK++VKTPEQCG LTFPISLKQPGPR++ IQCFIKRER TST+RLY
Sbjct: 84  VVSCGSVCRSWRDITKEIVKTPEQCGCLTFPISLKQPGPRESQIQCFIKRERATSTFRLY 143

Query: 681 LGLSPALSGDMGKLLLAAKKIRRATCTEFLISLVADDFSKASNTYIGK 824
           LGLSPALSGD  KLLLAA+KIRRAT TEF+ISL+ DDFS+A+N Y+GK
Sbjct: 144 LGLSPALSGDASKLLLAARKIRRATSTEFVISLLGDDFSRATNAYVGK 191


Top