BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030890
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat...    67   3e-09
ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat...    65   7e-09
ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat...    64   3e-08
ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat...    60   2e-07

>ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 43/95 (45%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
 Frame = -1

Query: 265 MRTRGSISCFLRVQHWITLSSN---FRFSSTHSNNN----AVINDPRSRTQLLNSIRSLS 107
           MR   SI  F  ++++  LSSN   F    +HS++     A IN   SR Q L+S+R++ 
Sbjct: 1   MRRSSSIHGFPLLRYF-ALSSNPTHFLLHPSHSSSTFSTYASINT--SRAQFLDSLRNVK 57

Query: 106 DVDGAVTLFHEMAAMKPFPCVKDFNFLFTFVAKTK 2
            VD A+  +H+M  MKPFPCVKDFN LF  VAK K
Sbjct: 58  SVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMK 92


>ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
 Frame = -1

Query: 265 MRTRGSISCFLRVQHWITLSSN--FRFSSTHSNN--NAVINDPRSRTQLLNSIRSLSDVD 98
           MR    +  F  ++++ + S++  F    +HS++  + V +   SR Q L+S+R+   VD
Sbjct: 6   MRRSSCVHGFPLLRYFASSSNSKPFLLHPSHSSSTFSFVSDSDTSRAQFLDSMRNAKSVD 65

Query: 97  GAVTLFHEMAAMKPFPCVKDFNFLFTFVAKTK 2
            A+  +H+M  MKPFPCVKDFN LF+ VAK K
Sbjct: 66  VALDFYHKMVTMKPFPCVKDFNLLFSIVAKMK 97


>ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 6/69 (8%)
 Frame = -1

Query: 190 SSTH--SNNNAVINDPRSRTQLLNSIRSLSDVDGAVTL----FHEMAAMKPFPCVKDFNF 29
           S+TH  S +   I+D  +RT+LLNSIR+L   D AV++    FH M  + PFPC++DFN 
Sbjct: 22  SNTHPFSTSPPSISDAAARTRLLNSIRTLQSADAAVSVSVDFFHRMLTLNPFPCIQDFNL 81

Query: 28  LFTFVAKTK 2
           LF  VAK++
Sbjct: 82  LFGIVAKSQ 90


>ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = -1

Query: 211 LSSNFRFSSTHSNNNAVINDPRSRTQLLNSIRSLSDVDG--AVTLFHEMAAMKPFPCVKD 38
           L ++  +S   S +   I+D   RT LLNSIR+L   D   AV  FH M  + PFPC++D
Sbjct: 17  LITSLFYSHPFSTSPPPISDAAHRTLLLNSIRTLETADAVVAVDFFHRMLTLTPFPCIQD 76

Query: 37  FNFLFTFVAKTK 2
           FN LF  VAK++
Sbjct: 77  FNLLFGLVAKSQ 88