BLASTX nr result

ID: Glycyrrhiza23_contig00030880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030880
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612316.1| 2-succinylbenzoate-CoA ligase [Medicago trun...   118   4e-25
ref|XP_003538902.1| PREDICTED: putative acyl-CoA synthetase YngI...   114   6e-24
ref|XP_002268559.2| PREDICTED: medium-chain-fatty-acid--CoA liga...    94   1e-17
ref|XP_002337088.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002307223.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16

>ref|XP_003612316.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
           gi|355513651|gb|AES95274.1| 2-succinylbenzoate-CoA
           ligase [Medicago truncatula]
          Length = 550

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/78 (71%), Positives = 64/78 (82%)
 Frame = +1

Query: 1   HLHKVTHLCGSPTLLETIADYNALNCDHYKPLPHKVNVTVAGVLPPIQVLNKVAELGFDV 180
           H+HKVTHLCG+PTLLE IA     NC+  +P  HKV+VTVAG+LP  ++LNKVAELGFDV
Sbjct: 272 HVHKVTHLCGAPTLLEIIA-----NCEIIRPFSHKVSVTVAGILPSFKILNKVAELGFDV 326

Query: 181 NIGYGMTEALGPVIVRPW 234
           NIGYGMTE LGPVIVR W
Sbjct: 327 NIGYGMTETLGPVIVRKW 344


>ref|XP_003538902.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Glycine max]
          Length = 541

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/78 (73%), Positives = 65/78 (83%)
 Frame = +1

Query: 1   HLHKVTHLCGSPTLLETIADYNALNCDHYKPLPHKVNVTVAGVLPPIQVLNKVAELGFDV 180
           +L+KVT  CG+PTLL+ IA  NA   D  +PLPH+VNVTVAGVLPP  VLNKV++LGFDV
Sbjct: 268 YLYKVTQFCGAPTLLDMIA--NASPSDQ-RPLPHRVNVTVAGVLPPFHVLNKVSQLGFDV 324

Query: 181 NIGYGMTEALGPVIVRPW 234
           NIGYGMTE LGPVIVRPW
Sbjct: 325 NIGYGMTETLGPVIVRPW 342


>ref|XP_002268559.2| PREDICTED: medium-chain-fatty-acid--CoA ligase-like, partial [Vitis
           vinifera]
          Length = 482

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/77 (59%), Positives = 54/77 (70%)
 Frame = +1

Query: 4   LHKVTHLCGSPTLLETIADYNALNCDHYKPLPHKVNVTVAGVLPPIQVLNKVAELGFDVN 183
           LH VTH CG+P+LL  IAD    +    +PLPHKV++ +AG LPP QVL KV ELGF+V 
Sbjct: 208 LHNVTHFCGAPSLLNLIADAAVTD---QRPLPHKVDIVIAGALPPPQVLMKVVELGFNVT 264

Query: 184 IGYGMTEALGPVIVRPW 234
             YGMTEALGPV  R W
Sbjct: 265 HSYGMTEALGPVTARLW 281


>ref|XP_002337088.1| predicted protein [Populus trichocarpa] gi|222837992|gb|EEE76357.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/77 (59%), Positives = 52/77 (67%)
 Frame = +1

Query: 4   LHKVTHLCGSPTLLETIADYNALNCDHYKPLPHKVNVTVAGVLPPIQVLNKVAELGFDVN 183
           LHKVTH CG P +L TIA+  A N     PLP  VNV +AG  P  ++L KV  LGF+V 
Sbjct: 233 LHKVTHFCGPPAILNTIANAPAGN---QNPLPFNVNVIIAGPFPYSEILTKVEGLGFNVY 289

Query: 184 IGYGMTEALGPVIVRPW 234
            GYGMTEALGP IVRPW
Sbjct: 290 HGYGMTEALGPAIVRPW 306


>ref|XP_002307223.1| predicted protein [Populus trichocarpa] gi|222856672|gb|EEE94219.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/77 (57%), Positives = 50/77 (64%)
 Frame = +1

Query: 4   LHKVTHLCGSPTLLETIADYNALNCDHYKPLPHKVNVTVAGVLPPIQVLNKVAELGFDVN 183
           LHKVTH CG P +L TIA+  A       P P  VNV VAG LP  ++L KV  LGF+V 
Sbjct: 273 LHKVTHFCGPPAILNTIANAPA-RASSQSPFPCSVNVVVAGSLPNSEILTKVEGLGFNVY 331

Query: 184 IGYGMTEALGPVIVRPW 234
            GYGMTEALGP  +RPW
Sbjct: 332 HGYGMTEALGPATIRPW 348


Top