BLASTX nr result

ID: Glycyrrhiza23_contig00030860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030860
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612000.1| Nucleolar protein [Medicago truncatula] gi|3...   222   3e-56
ref|XP_003537588.1| PREDICTED: nucleolar protein 6-like [Glycine...   214   8e-54
ref|XP_003516574.1| PREDICTED: nucleolar protein 6-like [Glycine...   206   2e-51
ref|NP_176566.3| uncharacterized protein [Arabidopsis thaliana] ...   157   1e-36
ref|XP_002886383.1| hypothetical protein ARALYDRAFT_474974 [Arab...   154   7e-36

>ref|XP_003612000.1| Nucleolar protein [Medicago truncatula] gi|355513335|gb|AES94958.1|
           Nucleolar protein [Medicago truncatula]
          Length = 1048

 Score =  222 bits (565), Expect = 3e-56
 Identities = 105/120 (87%), Positives = 116/120 (96%)
 Frame = +2

Query: 119 NLASKQQISKSMKAVEIIRITLNFIATSDMWNRGLYFPKEGQSNITKEERTQLKGSFPVV 298
           +LAS+QQIS+SMKA+EIIRITLNFIATS+ W+RGLYFPKEG+ NITKE+R QLKGSFPVV
Sbjct: 265 HLASRQQISRSMKAIEIIRITLNFIATSETWSRGLYFPKEGEGNITKEDRMQLKGSFPVV 324

Query: 299 ICHPSGAFNLAFRMSRIGFTQLQDEAALTLKCMEKCRDGGFEEVFMTEIDYAVKYDYCMR 478
           +CHPSGAFNLAFRMSRIGF+QLQDEAALTLKCMEKCR GGFEEVFMT+IDYAVKYDYCMR
Sbjct: 325 MCHPSGAFNLAFRMSRIGFSQLQDEAALTLKCMEKCRGGGFEEVFMTKIDYAVKYDYCMR 384



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +2

Query: 2   KPLLIVYPAAKLAEVAGIFVRIIPSAASIFSLPKLNLKRN 121
           KP+LIVYPAAKL +V G FVRIIPSA  IFS+PKLN+ RN
Sbjct: 148 KPVLIVYPAAKLVDVDGFFVRIIPSAKDIFSIPKLNMTRN 187


>ref|XP_003537588.1| PREDICTED: nucleolar protein 6-like [Glycine max]
          Length = 1050

 Score =  214 bits (544), Expect = 8e-54
 Identities = 103/119 (86%), Positives = 111/119 (93%)
 Frame = +2

Query: 122 LASKQQISKSMKAVEIIRITLNFIATSDMWNRGLYFPKEGQSNITKEERTQLKGSFPVVI 301
           LASKQ IS SMKA EIIRITLNFIATS++W+RGLYFPKEGQSNITKE+R QLK SFPVVI
Sbjct: 272 LASKQHISNSMKATEIIRITLNFIATSELWSRGLYFPKEGQSNITKEQRMQLKESFPVVI 331

Query: 302 CHPSGAFNLAFRMSRIGFTQLQDEAALTLKCMEKCRDGGFEEVFMTEIDYAVKYDYCMR 478
           CHPSG FNLAFRMSRIGFT+LQ+EA LTL+CMEKCRD GFEEVFMT+IDYAVKYDYCMR
Sbjct: 332 CHPSGGFNLAFRMSRIGFTRLQNEATLTLRCMEKCRDCGFEEVFMTKIDYAVKYDYCMR 390



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +2

Query: 2   KPLLIVYPAAKLAEVAGIFVRIIPSAASIFSLPKLNLKRN 121
           KPLL+VYPAAKL EV G FVRIIPSA +IFS  KLNLKRN
Sbjct: 155 KPLLVVYPAAKLVEVPGFFVRIIPSAKAIFSTAKLNLKRN 194


>ref|XP_003516574.1| PREDICTED: nucleolar protein 6-like [Glycine max]
          Length = 1055

 Score =  206 bits (523), Expect = 2e-51
 Identities = 99/119 (83%), Positives = 108/119 (90%)
 Frame = +2

Query: 122 LASKQQISKSMKAVEIIRITLNFIATSDMWNRGLYFPKEGQSNITKEERTQLKGSFPVVI 301
           LASKQ I+ SMK+ EIIRITLNFIATS++W+RGLYFPKEG SNITKE+R QLK SFPVVI
Sbjct: 272 LASKQHITNSMKSTEIIRITLNFIATSELWSRGLYFPKEGHSNITKEQRMQLKESFPVVI 331

Query: 302 CHPSGAFNLAFRMSRIGFTQLQDEAALTLKCMEKCRDGGFEEVFMTEIDYAVKYDYCMR 478
            HP G FNLAFRMSRIGFTQLQ+EA LTL+CMEKCRDGGFEEVFMT+IDYA KYDYCMR
Sbjct: 332 SHPFGGFNLAFRMSRIGFTQLQNEATLTLRCMEKCRDGGFEEVFMTKIDYAGKYDYCMR 390



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +2

Query: 2   KPLLIVYPAAKLAEVAGIFVRIIPSAASIFSLPKLNLKRN 121
           KPLL+VYPAAKL EV G FVRIIPSA +IFS+ KLNLKR+
Sbjct: 155 KPLLVVYPAAKLVEVPGFFVRIIPSAKAIFSIAKLNLKRS 194


>ref|NP_176566.3| uncharacterized protein [Arabidopsis thaliana]
           gi|110741755|dbj|BAE98823.1| hypothetical protein
           [Arabidopsis thaliana] gi|332196029|gb|AEE34150.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 1053

 Score =  157 bits (396), Expect = 1e-36
 Identities = 71/119 (59%), Positives = 95/119 (79%)
 Frame = +2

Query: 122 LASKQQISKSMKAVEIIRITLNFIATSDMWNRGLYFPKEGQSNITKEERTQLKGSFPVVI 301
           LA+  +I+K++ A++I R+TL+FIATS +W RGLY P + +  ++KEE+ Q +  FPVVI
Sbjct: 272 LATHSKINKALSALDIFRVTLDFIATSKLWERGLYLPPQSEIRVSKEEKMQFRELFPVVI 331

Query: 302 CHPSGAFNLAFRMSRIGFTQLQDEAALTLKCMEKCRDGGFEEVFMTEIDYAVKYDYCMR 478
           C  S   NLAFRM+ +GF +LQDEA+LTLKCMEK RDGGFEE+FMT+IDY VKYD+C+R
Sbjct: 332 CDSSTFVNLAFRMTSVGFLELQDEASLTLKCMEKLRDGGFEEIFMTKIDYPVKYDHCIR 390


>ref|XP_002886383.1| hypothetical protein ARALYDRAFT_474974 [Arabidopsis lyrata subsp.
           lyrata] gi|297332224|gb|EFH62642.1| hypothetical protein
           ARALYDRAFT_474974 [Arabidopsis lyrata subsp. lyrata]
          Length = 1049

 Score =  154 bits (389), Expect = 7e-36
 Identities = 70/119 (58%), Positives = 94/119 (78%)
 Frame = +2

Query: 122 LASKQQISKSMKAVEIIRITLNFIATSDMWNRGLYFPKEGQSNITKEERTQLKGSFPVVI 301
           LA+  +I+K++ A++I R+TL+FIATS +W RGLY P + +  ++KEE+ Q +  FPVVI
Sbjct: 271 LATHAKINKALNALDIFRVTLDFIATSKLWERGLYLPPQSEIRVSKEEKMQFRELFPVVI 330

Query: 302 CHPSGAFNLAFRMSRIGFTQLQDEAALTLKCMEKCRDGGFEEVFMTEIDYAVKYDYCMR 478
           C  S   NLAFRM+ +GF +LQDEA+L LKCMEK RDGGFEE+FMT+IDY VKYD+C+R
Sbjct: 331 CDSSTFVNLAFRMTSVGFQELQDEASLMLKCMEKLRDGGFEEIFMTKIDYPVKYDHCIR 389


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