BLASTX nr result

ID: Glycyrrhiza23_contig00030859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030859
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543852.1| PREDICTED: structural maintenance of chromos...   244   4e-63
ref|XP_003629079.1| Structural maintenance of chromosomes protei...   243   2e-62
ref|XP_003554891.1| PREDICTED: structural maintenance of chromos...   238   3e-61
ref|XP_003625142.1| Structural maintenance of chromosomes protei...   222   3e-56
ref|XP_002534418.1| Structural maintenance of chromosome, putati...   216   2e-54

>ref|XP_003543852.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1319

 Score =  244 bits (624), Expect = 4e-63
 Identities = 127/154 (82%), Positives = 144/154 (93%)
 Frame = -2

Query: 463  GSKPKGGRIGTSIRATNVSVEAVASAERELSGLTDKLNVIRQRIINAVRQYQAAEKTVAA 284
            G KP+GG++GTSIRAT+VSVE+VA+AE+ELS LTDKLN IRQRI+ AV++YQA+EK VAA
Sbjct: 775  GGKPRGGKMGTSIRATSVSVESVANAEKELSRLTDKLNDIRQRIMAAVQRYQASEKAVAA 834

Query: 283  LEMELAKSQKEVDSLNSQHSYIEKQLDSLEAASKPQEDELDRLKELKKIISAEEREINRL 104
            LEMELAKSQKEVDSLNSQ++YIEKQLDSLEAAS PQEDELDRLKELKKI+SAEEREINRL
Sbjct: 835  LEMELAKSQKEVDSLNSQYNYIEKQLDSLEAASTPQEDELDRLKELKKIVSAEEREINRL 894

Query: 103  TDGSRQLKEKVSELQRNIENAGGEKLKSQKSKVQ 2
             +GS+QLKEK  ELQRN+EN GGEKLKSQKSKVQ
Sbjct: 895  NNGSKQLKEKALELQRNLENVGGEKLKSQKSKVQ 928


>ref|XP_003629079.1| Structural maintenance of chromosomes protein [Medicago truncatula]
            gi|355523101|gb|AET03555.1| Structural maintenance of
            chromosomes protein [Medicago truncatula]
          Length = 1252

 Score =  243 bits (619), Expect = 2e-62
 Identities = 129/154 (83%), Positives = 140/154 (90%)
 Frame = -2

Query: 463  GSKPKGGRIGTSIRATNVSVEAVASAERELSGLTDKLNVIRQRIINAVRQYQAAEKTVAA 284
            GS PKGG++GTSIRATNVS EAVASAE ELSGLTDKLN IRQR+++AV+ YQ AEK +AA
Sbjct: 699  GSTPKGGKMGTSIRATNVSGEAVASAESELSGLTDKLNKIRQRMMDAVKVYQEAEKKIAA 758

Query: 283  LEMELAKSQKEVDSLNSQHSYIEKQLDSLEAASKPQEDELDRLKELKKIISAEEREINRL 104
             EMELAKSQKEVDSLNSQHSYIEKQL SLE AS PQE+ELDRLKEL KIISAEEREINRL
Sbjct: 759  WEMELAKSQKEVDSLNSQHSYIEKQLGSLEVASNPQENELDRLKELMKIISAEEREINRL 818

Query: 103  TDGSRQLKEKVSELQRNIENAGGEKLKSQKSKVQ 2
            TDGS++LKEKVSELQ+ IENAGGEKLKSQK KVQ
Sbjct: 819  TDGSKKLKEKVSELQKKIENAGGEKLKSQKLKVQ 852


>ref|XP_003554891.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1242

 Score =  238 bits (608), Expect = 3e-61
 Identities = 123/154 (79%), Positives = 142/154 (92%)
 Frame = -2

Query: 463  GSKPKGGRIGTSIRATNVSVEAVASAERELSGLTDKLNVIRQRIINAVRQYQAAEKTVAA 284
            GSKP+GG++GTSIRAT++S E+VA+AE+ELS LT+KLN  RQRI+ AV+ YQA+EK VAA
Sbjct: 698  GSKPRGGKMGTSIRATSMSAESVANAEKELSRLTNKLNDFRQRIMAAVQHYQASEKAVAA 757

Query: 283  LEMELAKSQKEVDSLNSQHSYIEKQLDSLEAASKPQEDELDRLKELKKIISAEEREINRL 104
            LEMELAKSQKEVDSL SQ++YIEKQLDSLEAAS PQEDELDR+KELKKI+SAEEREINRL
Sbjct: 758  LEMELAKSQKEVDSLKSQYNYIEKQLDSLEAASMPQEDELDRMKELKKIVSAEEREINRL 817

Query: 103  TDGSRQLKEKVSELQRNIENAGGEKLKSQKSKVQ 2
            T+GS+QLKEK  ELQRN+EN GGEKLKSQKSKVQ
Sbjct: 818  TNGSKQLKEKALELQRNLENVGGEKLKSQKSKVQ 851


>ref|XP_003625142.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355500157|gb|AES81360.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 1017

 Score =  222 bits (565), Expect = 3e-56
 Identities = 118/154 (76%), Positives = 133/154 (86%)
 Frame = -2

Query: 463 GSKPKGGRIGTSIRATNVSVEAVASAERELSGLTDKLNVIRQRIINAVRQYQAAEKTVAA 284
           GSKPKGG++GTSIR TNVS E VA AE ELSGLT++LN IRQ +++AV+QYQ AEK +AA
Sbjct: 404 GSKPKGGKMGTSIRGTNVSGEDVARAETELSGLTNELNEIRQGMMDAVKQYQDAEKNIAA 463

Query: 283 LEMELAKSQKEVDSLNSQHSYIEKQLDSLEAASKPQEDELDRLKELKKIISAEEREINRL 104
           L+M+LAKS KEVDSLNSQHSYIEKQ  SLE ASKPQE+ELDRL+ELK  I  EEREINRL
Sbjct: 464 LKMKLAKSLKEVDSLNSQHSYIEKQFGSLEVASKPQENELDRLEELKNSIFPEEREINRL 523

Query: 103 TDGSRQLKEKVSELQRNIENAGGEKLKSQKSKVQ 2
            DGS++LKEKVSELQ  IENAGGEKLKSQK KVQ
Sbjct: 524 ADGSKKLKEKVSELQTKIENAGGEKLKSQKLKVQ 557


>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
            gi|223525329|gb|EEF27966.1| Structural maintenance of
            chromosome, putative [Ricinus communis]
          Length = 1259

 Score =  216 bits (550), Expect = 2e-54
 Identities = 109/154 (70%), Positives = 135/154 (87%)
 Frame = -2

Query: 463  GSKPKGGRIGTSIRATNVSVEAVASAERELSGLTDKLNVIRQRIINAVRQYQAAEKTVAA 284
            GSKP+GG++GTSIR+ +VS E VA+AE+ELS +  KLN IRQ+II+AVR YQA+EK +  
Sbjct: 701  GSKPRGGKMGTSIRSASVSAEVVANAEKELSTMVGKLNDIRQKIIDAVRSYQASEKAITH 760

Query: 283  LEMELAKSQKEVDSLNSQHSYIEKQLDSLEAASKPQEDELDRLKELKKIISAEEREINRL 104
            +EMELAKSQKE+DSLNS+HSY+EKQL SLEAAS+P++DELDRLKELKKIIS+EE EI+RL
Sbjct: 761  MEMELAKSQKEIDSLNSEHSYLEKQLGSLEAASQPKKDELDRLKELKKIISSEEMEIDRL 820

Query: 103  TDGSRQLKEKVSELQRNIENAGGEKLKSQKSKVQ 2
            T GS++LKEK  ELQ  IENAGGE LK+QK+KV+
Sbjct: 821  TQGSKKLKEKALELQNKIENAGGETLKAQKAKVK 854


Top