BLASTX nr result

ID: Glycyrrhiza23_contig00030834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030834
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_003598203.1| Pentatricopeptide repeat-containing protein ...    98   8e-19
ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]    92   6e-17

>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = -3

Query: 396 QKVTFETLYRGLIQSDMLRTWRRLKKKLDQESITFGSEFQNYPLKPYRR 250
           QKVTFETLY+GLIQSDMLRTWRRLKKKLD+ESITFGSEFQNY LKPYRR
Sbjct: 500 QKVTFETLYKGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYQLKPYRR 548


>ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487251|gb|AES68454.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 503

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = -3

Query: 396 QKVTFETLYRGLIQSDMLRTWRRLKKKLDQESITFGSEFQNYPLKPYRR 250
           QKVTFETLYRGLIQSDMLRTWRRLKK+LDQESITFGSEFQNY LKPY+R
Sbjct: 455 QKVTFETLYRGLIQSDMLRTWRRLKKRLDQESITFGSEFQNYHLKPYKR 503


>ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Glycine max]
          Length = 510

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = -3

Query: 393 KVTFETLYRGLIQSDMLRTWRRLKKKLDQESITFGSEFQNYPLKPYRR 250
           K TFE+LYRGLIQ+DMLRTWRRLKKKLD+ESITFGSEFQNY LKPYRR
Sbjct: 463 KGTFESLYRGLIQADMLRTWRRLKKKLDEESITFGSEFQNYQLKPYRR 510


>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = -3

Query: 396 QKVTFETLYRGLIQSDMLRTWRRLKKKLDQESITFGSEFQNYPLKPYRR 250
           QK+TFETLYRGLIQSDML+TWRRLKKKL++ESITFGSEFQ Y  KPYRR
Sbjct: 477 QKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFGSEFQQYHFKPYRR 525


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = -3

Query: 396 QKVTFETLYRGLIQSDMLRTWRRLKKKLDQESITFGSEFQNYPLKPYRR 250
           QK+TFETLYRGLIQSDML+TWRRLKKKL++ESITFGSEFQ Y  KPYRR
Sbjct: 477 QKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFGSEFQXYHFKPYRR 525


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