BLASTX nr result

ID: Glycyrrhiza23_contig00030816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030816
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617994.1| F-box/kelch-repeat protein [Medicago truncat...    71   8e-11
ref|XP_003614798.1| F-box protein [Medicago truncatula] gi|35551...    69   5e-10
ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|35548...    67   2e-09
gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction doma...    67   2e-09
ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552...    66   3e-09

>ref|XP_003617994.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355519329|gb|AET00953.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 269

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = +1

Query: 10  SIMISGSVNGTLCL-GQGITKIALWNLATKEFKVISPSPIESVPHWRLITFPYGFGYDRI 186
           +I+ SGSV+GT+CL       I LWN + KEFK++ PSP +S P+W ++     FGYDR+
Sbjct: 132 NIIGSGSVHGTICLLCASQENIILWNPSNKEFKLLPPSPFDSEPYWGVLIDHRSFGYDRV 191

Query: 187 RDDYKV 204
           RDDYKV
Sbjct: 192 RDDYKV 197


>ref|XP_003614798.1| F-box protein [Medicago truncatula] gi|355516133|gb|AES97756.1|
           F-box protein [Medicago truncatula]
          Length = 427

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/64 (54%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
 Frame = +1

Query: 22  SGSVNGTL---CLGQGITKIALWNLATKEFKVISPSPIESVPHWRLITFPYGFGYDRIRD 192
           SGSV+GTL   C   G     LWN +TKE K+I PSP +S P+WR      GFGYD +RD
Sbjct: 150 SGSVHGTLYMVCAHNG--NFILWNPSTKESKLIPPSPFDSEPNWRFCVIHRGFGYDSVRD 207

Query: 193 DYKV 204
           DYKV
Sbjct: 208 DYKV 211


>ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|355483183|gb|AES64386.1|
           F-box protein [Medicago truncatula]
          Length = 460

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RDDSIMISGSVNGTLCLGQGIT---KIALWNLATKEFKVISPSPIESVPHWRLITFPYGF 171
           +D  I+ S S+NG LCL   +    K  LWN  TKEF VI  SP+ES+P+ +   F +GF
Sbjct: 122 QDIYILGSISINGFLCLSNLLDDERKAVLWNPTTKEFIVIPSSPVESLPYRKFEAFIHGF 181

Query: 172 GYDRIRDDYKV 204
           GYD + DDYKV
Sbjct: 182 GYDHVMDDYKV 192


>gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction domain [Medicago
           truncatula]
          Length = 438

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   RDDSIMISGSVNGTLCLGQGIT---KIALWNLATKEFKVISPSPIESVPHWRLITFPYGF 171
           +D  I+ S S+NG LCL   +    K  LWN  TKEF VI  SP+ES+P+ +   F +GF
Sbjct: 122 QDIYILGSISINGFLCLSNLLDDERKAVLWNPTTKEFIVIPSSPVESLPYRKFEAFIHGF 181

Query: 172 GYDRIRDDYKV 204
           GYD + DDYKV
Sbjct: 182 GYDHVMDDYKV 192


>ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1|
           F-box protein [Medicago truncatula]
          Length = 384

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/66 (50%), Positives = 40/66 (60%)
 Frame = +1

Query: 7   DSIMISGSVNGTLCLGQGITKIALWNLATKEFKVISPSPIESVPHWRLITFPYGFGYDRI 186
           D  ++   +NGTLCL +    I LWN    EFKVI PSPI+S  H       +GFGYD +
Sbjct: 110 DMDILGSGINGTLCLHRYHRTIVLWNPTIGEFKVIPPSPIDSQLHDPTSVTLHGFGYDSV 169

Query: 187 RDDYKV 204
           RDDYKV
Sbjct: 170 RDDYKV 175


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