BLASTX nr result
ID: Glycyrrhiza23_contig00030816
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00030816 (206 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003617994.1| F-box/kelch-repeat protein [Medicago truncat... 71 8e-11 ref|XP_003614798.1| F-box protein [Medicago truncatula] gi|35551... 69 5e-10 ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|35548... 67 2e-09 gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction doma... 67 2e-09 ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552... 66 3e-09 >ref|XP_003617994.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355519329|gb|AET00953.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 269 Score = 71.2 bits (173), Expect = 8e-11 Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Frame = +1 Query: 10 SIMISGSVNGTLCL-GQGITKIALWNLATKEFKVISPSPIESVPHWRLITFPYGFGYDRI 186 +I+ SGSV+GT+CL I LWN + KEFK++ PSP +S P+W ++ FGYDR+ Sbjct: 132 NIIGSGSVHGTICLLCASQENIILWNPSNKEFKLLPPSPFDSEPYWGVLIDHRSFGYDRV 191 Query: 187 RDDYKV 204 RDDYKV Sbjct: 192 RDDYKV 197 >ref|XP_003614798.1| F-box protein [Medicago truncatula] gi|355516133|gb|AES97756.1| F-box protein [Medicago truncatula] Length = 427 Score = 68.6 bits (166), Expect = 5e-10 Identities = 35/64 (54%), Positives = 41/64 (64%), Gaps = 3/64 (4%) Frame = +1 Query: 22 SGSVNGTL---CLGQGITKIALWNLATKEFKVISPSPIESVPHWRLITFPYGFGYDRIRD 192 SGSV+GTL C G LWN +TKE K+I PSP +S P+WR GFGYD +RD Sbjct: 150 SGSVHGTLYMVCAHNG--NFILWNPSTKESKLIPPSPFDSEPNWRFCVIHRGFGYDSVRD 207 Query: 193 DYKV 204 DYKV Sbjct: 208 DYKV 211 >ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|355483183|gb|AES64386.1| F-box protein [Medicago truncatula] Length = 460 Score = 67.0 bits (162), Expect = 2e-09 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 3/71 (4%) Frame = +1 Query: 1 RDDSIMISGSVNGTLCLGQGIT---KIALWNLATKEFKVISPSPIESVPHWRLITFPYGF 171 +D I+ S S+NG LCL + K LWN TKEF VI SP+ES+P+ + F +GF Sbjct: 122 QDIYILGSISINGFLCLSNLLDDERKAVLWNPTTKEFIVIPSSPVESLPYRKFEAFIHGF 181 Query: 172 GYDRIRDDYKV 204 GYD + DDYKV Sbjct: 182 GYDHVMDDYKV 192 >gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction domain [Medicago truncatula] Length = 438 Score = 67.0 bits (162), Expect = 2e-09 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 3/71 (4%) Frame = +1 Query: 1 RDDSIMISGSVNGTLCLGQGIT---KIALWNLATKEFKVISPSPIESVPHWRLITFPYGF 171 +D I+ S S+NG LCL + K LWN TKEF VI SP+ES+P+ + F +GF Sbjct: 122 QDIYILGSISINGFLCLSNLLDDERKAVLWNPTTKEFIVIPSSPVESLPYRKFEAFIHGF 181 Query: 172 GYDRIRDDYKV 204 GYD + DDYKV Sbjct: 182 GYDHVMDDYKV 192 >ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1| F-box protein [Medicago truncatula] Length = 384 Score = 66.2 bits (160), Expect = 3e-09 Identities = 33/66 (50%), Positives = 40/66 (60%) Frame = +1 Query: 7 DSIMISGSVNGTLCLGQGITKIALWNLATKEFKVISPSPIESVPHWRLITFPYGFGYDRI 186 D ++ +NGTLCL + I LWN EFKVI PSPI+S H +GFGYD + Sbjct: 110 DMDILGSGINGTLCLHRYHRTIVLWNPTIGEFKVIPPSPIDSQLHDPTSVTLHGFGYDSV 169 Query: 187 RDDYKV 204 RDDYKV Sbjct: 170 RDDYKV 175