BLASTX nr result

ID: Glycyrrhiza23_contig00030800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030800
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat...    98   8e-19
emb|CBI30347.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...    89   4e-16
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]    89   4e-16
ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat...    86   4e-15

>ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Glycine max]
          Length = 566

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/73 (67%), Positives = 58/73 (79%)
 Frame = -3

Query: 219 DVFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXXXVEAKKVFDVM 40
           D++VGTSLIDMYGKCGEI DARK+FD MS+ RNVVSWTAM          VEA+K+FD M
Sbjct: 162 DLYVGTSLIDMYGKCGEIADARKVFDGMSD-RNVVSWTAMLVGYVAVGDVVEARKLFDEM 220

Query: 39  PKRNVASWNAILR 1
           P RNVASWN++L+
Sbjct: 221 PHRNVASWNSMLQ 233


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/72 (63%), Positives = 54/72 (75%)
 Frame = -3

Query: 219 DVFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXXXVEAKKVFDVM 40
           DVFV TSLID+YGKCGEI  ARK+FD+M E RNVVSWTAM          VEA+K+FD M
Sbjct: 205 DVFVMTSLIDLYGKCGEILCARKVFDEMGE-RNVVSWTAMIAGYASFSDLVEARKLFDEM 263

Query: 39  PKRNVASWNAIL 4
           P++N  SWNAI+
Sbjct: 264 PEKNAVSWNAII 275


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/72 (63%), Positives = 54/72 (75%)
 Frame = -3

Query: 219 DVFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXXXVEAKKVFDVM 40
           DVFV TSLID+YGKCGEI  ARK+FD+M E RNVVSWTAM          VEA+K+FD M
Sbjct: 157 DVFVMTSLIDLYGKCGEILCARKVFDEMGE-RNVVSWTAMIAGYASFSDLVEARKLFDEM 215

Query: 39  PKRNVASWNAIL 4
           P++N  SWNAI+
Sbjct: 216 PEKNAVSWNAII 227


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/72 (63%), Positives = 54/72 (75%)
 Frame = -3

Query: 219 DVFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXXXVEAKKVFDVM 40
           DVFV TSLID+YGKCGEI  ARK+FD+M E RNVVSWTAM          VEA+K+FD M
Sbjct: 157 DVFVMTSLIDLYGKCGEILCARKVFDEMGE-RNVVSWTAMIAGYASFSDLVEARKLFDEM 215

Query: 39  PKRNVASWNAIL 4
           P++N  SWNAI+
Sbjct: 216 PEKNAVSWNAII 227


>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
           gi|449519310|ref|XP_004166678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 565

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)
 Frame = -3

Query: 222 DDVFVGTSLIDMYGKCGEIGDARKMFDKMSERRNVVSWTAMXXXXXXXXXXVEAKKVFDV 43
           +D++V TSL+++YGK G I  ARK+FD MSER NVVSWTAM          VEAK++FD+
Sbjct: 160 EDIYVTTSLVNLYGKGGLIDCARKVFDGMSER-NVVSWTAMIVGYSSIGNLVEAKRLFDL 218

Query: 42  MPKRNVASWNAIL 4
           MP+RNVASWNAI+
Sbjct: 219 MPERNVASWNAII 231


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