BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030788
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]   134   6e-30
ref|XP_002509440.1| pentatricopeptide repeat-containing protein,...   125   5e-27
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   122   2e-26

>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  179 bits (454), Expect = 2e-43
 Identities = 87/100 (87%), Positives = 93/100 (93%)
 Frame = +3

Query: 3   QCGDDFQAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFY 182
           QCGD   AVSLFS+M  E++DFNQTTLSTVLKSVASL AIK CKQIHT+S+KSGIYSDFY
Sbjct: 362 QCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFY 421

Query: 183 VINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
           VINSLLDTYGKC+HIDEASKIFEERTWEDLVAYTSMITAY
Sbjct: 422 VINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAY 461



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/100 (31%), Positives = 57/100 (57%)
 Frame = +3

Query: 3   QCGDDFQAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFY 182
           Q GD  +A+ L+ +M   ++  +    S++L + A+L A +  KQ+H  ++K G   D +
Sbjct: 463 QYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIF 522

Query: 183 VINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
             NSL++ Y KC  I++A + F E     +V++++MI  Y
Sbjct: 523 ASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGY 562



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/93 (29%), Positives = 52/93 (55%)
 Frame = +3

Query: 24  AVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLD 203
           A+ L  EM       N  TLS+ LK+ A++   +  +Q+H+  +K   +SD +    L+D
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVD 327

Query: 204 TYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
            Y KC  +D+A + ++    +D++A+ ++I+ Y
Sbjct: 328 MYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360


>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/100 (62%), Positives = 80/100 (80%)
 Frame = +3

Query: 3   QCGDDFQAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFY 182
           Q  +D +A+SLF EMH E + FNQTTLST+LKS A L  +  C+Q+H LSVKSG +SD Y
Sbjct: 437 QYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIY 496

Query: 183 VINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
           V+NSL+D+YGKCSH+++A +IFEE T  DLV++TSMITAY
Sbjct: 497 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY 536



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/97 (34%), Positives = 55/97 (56%)
 Frame = +3

Query: 3   QCGDDFQAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFY 182
           Q G   +A+ LF EM    +  ++   S++L + A+L A +  KQ+H   +K G   D +
Sbjct: 538 QYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIF 597

Query: 183 VINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMI 293
             NSL++ Y KC  ID+A + F E T   +V++++MI
Sbjct: 598 AGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMI 634



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/93 (30%), Positives = 54/93 (58%)
 Frame = +3

Query: 24  AVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLD 203
           A+  F EMH   +  N+ T S+VLK+ + +  ++  KQ+H + V SG   D +V N+L+ 
Sbjct: 141 ALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVV 200

Query: 204 TYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
            Y KC    ++ ++F+E    ++V++ ++ + Y
Sbjct: 201 MYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/94 (30%), Positives = 52/94 (55%)
 Frame = +3

Query: 21  QAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLL 200
           QA+ L  +M    +  N  TLS+ LK+ A +   +  +Q+H+  +K  + SD +V   L+
Sbjct: 342 QALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLV 401

Query: 201 DTYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
           D Y KC  +++A   F     +DL+A+ ++I+ Y
Sbjct: 402 DMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 435


>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/100 (62%), Positives = 80/100 (80%)
 Frame = +3

Query: 3   QCGDDFQAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFY 182
           Q  +D +A+SLF EMH E + FNQTTLST+LKS A L  +  C+Q+H LSVKSG +SD Y
Sbjct: 410 QYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIY 469

Query: 183 VINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
           V+NSL+D+YGKCSH+++A +IFEE T  DLV++TSMITAY
Sbjct: 470 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY 509



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/97 (34%), Positives = 55/97 (56%)
 Frame = +3

Query: 3   QCGDDFQAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFY 182
           Q G   +A+ LF EM    +  ++   S++L + A+L A +  KQ+H   +K G   D +
Sbjct: 511 QYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIF 570

Query: 183 VINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMI 293
             NSL++ Y KC  ID+A + F E T   +V++++MI
Sbjct: 571 AGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMI 607



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/93 (30%), Positives = 54/93 (58%)
 Frame = +3

Query: 24  AVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYVINSLLD 203
           A+  F EMH   +  N+ T S+VLK+ + +  ++  KQ+H + V SG   D +V N+L+ 
Sbjct: 141 ALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVV 200

Query: 204 TYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
            Y KC    ++ ++F+E    ++V++ ++ + Y
Sbjct: 201 MYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233


>ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549339|gb|EEF50827.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/100 (63%), Positives = 74/100 (74%)
 Frame = +3

Query: 3   QCGDDFQAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFY 182
           Q G+D +AVSLF  MH E + FNQ TLSTVLKSVASL     C QIH LS+KSG   D Y
Sbjct: 418 QNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSVASLQVDHICSQIHALSLKSGFQFDNY 477

Query: 183 VINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
           V NSL+DTYGKC  I +A++IF+E  + DLVA+TSMITAY
Sbjct: 478 VANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITAY 517



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/100 (32%), Positives = 55/100 (55%)
 Frame = +3

Query: 3   QCGDDFQAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFY 182
           Q G   +A+ L+ EM    +  +    S++L + A+L A +  KQ+H   +K G  SD +
Sbjct: 519 QDGQGEEALKLYLEMQDRKIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKFGFISDIF 578

Query: 183 VINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
             NSL++ Y KC  ID+A + F E     +V++++MI  +
Sbjct: 579 AGNSLVNMYAKCGSIDDADRAFSEIPERGIVSWSAMIGGF 618


>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/99 (59%), Positives = 76/99 (76%)
 Frame = +3

Query: 6   CGDDFQAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFYV 185
           CG D +A+SLF+ M+ E ++FNQTTLST+LKS A   A   C+Q+HT+S+KSG   D YV
Sbjct: 368 CGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYV 427

Query: 186 INSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAY 302
            NSLLD+YGKC  +++A+K+FE    EDLVAYTSMITAY
Sbjct: 428 ANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAY 466



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/97 (34%), Positives = 57/97 (58%)
 Frame = +3

Query: 3   QCGDDFQAVSLFSEMHHENMDFNQTTLSTVLKSVASLHAIKACKQIHTLSVKSGIYSDFY 182
           Q G   +A+ ++  M   ++  +    S++  + A+L A +  KQIH   +K G+ SD +
Sbjct: 468 QYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVF 527

Query: 183 VINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMI 293
             NSL++ Y KC  ID+AS IF E +W  +V++++MI
Sbjct: 528 AGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMI 564