BLASTX nr result

ID: Glycyrrhiza23_contig00030765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030765
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596211.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   140   1e-31
ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   139   2e-31
ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   138   4e-31
ref|XP_002530131.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
ref|XP_002317364.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_003596211.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355485259|gb|AES66462.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 983

 Score =  140 bits (352), Expect = 1e-31
 Identities = 73/105 (69%), Positives = 81/105 (77%)
 Frame = -1

Query: 315 EFETDFIAEGGNVVKGGNYHSDEAAQYKCSSEMTTKGSAKAKKISHPPKAKCSKSPNSTS 136
           EFET+       V KGG++HSDEAAQ+KCSSE T KGSAKAKK SH  KAK SKSP STS
Sbjct: 314 EFETNV------VTKGGHHHSDEAAQHKCSSETTVKGSAKAKKPSHTSKAKLSKSPKSTS 367

Query: 135 KTSMDFYYPEIDKKVKIPDEPKVAGIRDTVPLHGNNGAASIGIMK 1
           KTS+DF  PEI+KK KIPDEPKVAG R T+PLHG NG  S G+MK
Sbjct: 368 KTSIDFCDPEIEKKGKIPDEPKVAGSRSTLPLHGINGVTSTGLMK 412


>ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
           max]
          Length = 989

 Score =  139 bits (351), Expect = 2e-31
 Identities = 75/107 (70%), Positives = 79/107 (73%), Gaps = 2/107 (1%)
 Frame = -1

Query: 315 EFETDFIAEGGNVVKGGNYHSDEAAQYKCSSEMTTKGSAKAKKISHPPKAKCSKSPNSTS 136
           EFET+  A G NVVKGGNYHSDEAA+YK  SE T KGS KAKKI H PK K SKSP STS
Sbjct: 311 EFETEITARGVNVVKGGNYHSDEAAKYKRPSETTIKGSMKAKKILHTPKTKSSKSPKSTS 370

Query: 135 KTSMDFYYPEIDKKVKIPDEPKVAGIRDTVPLHGN--NGAASIGIMK 1
           KTS DF   EI+KK K  DE KVAG  DT+PLHGN  NG AS GIMK
Sbjct: 371 KTSADFCCSEIEKKGKTADELKVAGNSDTIPLHGNGSNGVASTGIMK 417


>ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
           max]
          Length = 990

 Score =  138 bits (348), Expect = 4e-31
 Identities = 74/107 (69%), Positives = 79/107 (73%), Gaps = 2/107 (1%)
 Frame = -1

Query: 315 EFETDFIAEGGNVVKGGNYHSDEAAQYKCSSEMTTKGSAKAKKISHPPKAKCSKSPNSTS 136
           EFETD   +G +VVKGGNYHSDEAAQYK  SE T KGS KAKKI H PK K SKSP STS
Sbjct: 313 EFETDITTKGVSVVKGGNYHSDEAAQYKRPSESTIKGSMKAKKILHTPKTKSSKSPKSTS 372

Query: 135 KTSMDFYYPEIDKKVKIPDEPKVAGIRDTVPLHGN--NGAASIGIMK 1
           KTS DF   EI+KK K  DE KVAG  DT+PLHGN  NG A+ GIMK
Sbjct: 373 KTSADFCCSEIEKKGKTADELKVAGNSDTIPLHGNGSNGTANTGIMK 419


>ref|XP_002530131.1| conserved hypothetical protein [Ricinus communis]
           gi|223530356|gb|EEF32247.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 870

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
 Frame = -1

Query: 315 EFETDFIAEGGNVVKGGNYHSDEAAQYKCSSEMTT-KGSAKAKKISHPPKAKCSKSPNST 139
           E ETDF   GGN+    N  +D+  +  CS E    K + +AK  S P   K SKS  ST
Sbjct: 270 ETETDFTWNGGNMPNVENNLNDQTVELNCSYEAPVMKENERAKFASQPTGTKISKSSKST 329

Query: 138 SKTSMDFYYPEIDKKVKIPDEPKVAGIRDTVPLHGNNGAASIGIMK 1
            K   +  Y  +++K    D+ K   +R  +P  G+NG AS GIMK
Sbjct: 330 MKVFAEPSYTGVEEKGLSGDDSKDVRMRHAIPAPGSNGVASTGIMK 375


>ref|XP_002317364.1| predicted protein [Populus trichocarpa] gi|222860429|gb|EEE97976.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 44/109 (40%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
 Frame = -1

Query: 315 EFETDFIAEGGNVVKGGNYHSD---EAAQYKCSSEM-TTKGSAKAKKISHPPKAKCSKSP 148
           E  T+F+    NVV   N  +    E A  KC  E   T G+ KA    HP   K  KS 
Sbjct: 228 EIGTNFVF---NVVDFSNAEASVDGEMAGPKCYYETPVTNGNVKANTALHPMGNKSLKSS 284

Query: 147 NSTSKTSMDFYYPEIDKKVKIPDEPKVAGIRDTVPLHGNNGAASIGIMK 1
            S  K S D  Y +ID K ++ D+ KVA +R+  P  G NG  SIGIMK
Sbjct: 285 KSKMKFSGDQSYFKIDGKGQLTDDSKVARMRNANPAAGTNGVTSIGIMK 333


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