BLASTX nr result

ID: Glycyrrhiza23_contig00030757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030757
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520812.1| PREDICTED: pentatricopeptide repeat-containi...   177   8e-43
ref|XP_003626292.1| Pentatricopeptide repeat-containing protein ...   176   2e-42
emb|CBI36792.3| unnamed protein product [Vitis vinifera]              156   2e-36
ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]   156   2e-36

>ref|XP_003520812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Glycine max]
          Length = 753

 Score =  177 bits (449), Expect = 8e-43
 Identities = 85/93 (91%), Positives = 90/93 (96%)
 Frame = -1

Query: 279 LESMTRDHGISPRSEHYACVVDMLGRAGHLKEAKEFIEGLPEHPGILVWQALLGACSIHG 100
           LESMTRDHG+SPRSEHYACVVDMLGRAG LKEAK+FIEGLPE+PG+LVWQALLGACSIHG
Sbjct: 314 LESMTRDHGLSPRSEHYACVVDMLGRAGLLKEAKKFIEGLPENPGVLVWQALLGACSIHG 373

Query: 99  DSEMGKYAADQLFLATPASPAPYVLMANIYSVE 1
           DSEMGKYAA+QLFLATP SPAPYVLMANIYS E
Sbjct: 374 DSEMGKYAANQLFLATPDSPAPYVLMANIYSSE 406


>ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355501307|gb|AES82510.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  176 bits (446), Expect = 2e-42
 Identities = 84/93 (90%), Positives = 87/93 (93%)
 Frame = -1

Query: 279 LESMTRDHGISPRSEHYACVVDMLGRAGHLKEAKEFIEGLPEHPGILVWQALLGACSIHG 100
           LESMT DHGISPRSEHYACVVDMLGRAGHL EAK+FIEGLPEH G+LVWQALLGACSIHG
Sbjct: 476 LESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHG 535

Query: 99  DSEMGKYAADQLFLATPASPAPYVLMANIYSVE 1
           DSEMGKYAAD+LF A PASPAPYVLMANIYS E
Sbjct: 536 DSEMGKYAADRLFSAAPASPAPYVLMANIYSSE 568


>emb|CBI36792.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/93 (79%), Positives = 82/93 (88%)
 Frame = -1

Query: 279 LESMTRDHGISPRSEHYACVVDMLGRAGHLKEAKEFIEGLPEHPGILVWQALLGACSIHG 100
           LESM +D+GI PR EHYACVVDM+GRAG L EAK+FIE LPE PGILVWQALLGACSIHG
Sbjct: 64  LESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHG 123

Query: 99  DSEMGKYAADQLFLATPASPAPYVLMANIYSVE 1
           +SEMGKYAA+QLFL  P SPAPY+L+ANIYS E
Sbjct: 124 NSEMGKYAANQLFLQAPESPAPYILLANIYSSE 156


>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/93 (79%), Positives = 82/93 (88%)
 Frame = -1

Query: 279 LESMTRDHGISPRSEHYACVVDMLGRAGHLKEAKEFIEGLPEHPGILVWQALLGACSIHG 100
           LESM +D+GI PR EHYACVVDM+GRAG L EAK+FIE LPE PGILVWQALLGACSIHG
Sbjct: 482 LESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHG 541

Query: 99  DSEMGKYAADQLFLATPASPAPYVLMANIYSVE 1
           +SEMGKYAA+QLFL  P SPAPY+L+ANIYS E
Sbjct: 542 NSEMGKYAANQLFLQAPESPAPYILLANIYSSE 574


>emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/93 (79%), Positives = 82/93 (88%)
 Frame = -1

Query: 279 LESMTRDHGISPRSEHYACVVDMLGRAGHLKEAKEFIEGLPEHPGILVWQALLGACSIHG 100
           LESM +D+GI PR EHYACVVDM+GRAG L EAK+FIE LPE PGILVWQALLGACSIHG
Sbjct: 368 LESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHG 427

Query: 99  DSEMGKYAADQLFLATPASPAPYVLMANIYSVE 1
           +SEMGKYAA+QLFL  P SPAPY+L+ANIYS E
Sbjct: 428 NSEMGKYAANQLFLQAPESPAPYILLANIYSSE 460


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