BLASTX nr result
ID: Glycyrrhiza23_contig00030731
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00030731
(645 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003555400.1| PREDICTED: protein timeless homolog [Glycine... 288 8e-76
ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago ... 286 2e-75
ref|XP_003535579.1| PREDICTED: uncharacterized protein LOC100785... 280 2e-73
emb|CBI22579.3| unnamed protein product [Vitis vinifera] 189 4e-46
ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v... 189 4e-46
>ref|XP_003555400.1| PREDICTED: protein timeless homolog [Glycine max]
Length = 1171
Score = 288 bits (736), Expect = 8e-76
Identities = 144/185 (77%), Positives = 162/185 (87%), Gaps = 2/185 (1%)
Frame = +2
Query: 80 RFKDDRNCSRCIAEALDPDGKISPAQISNKLKKLGLAIAPRKKMGDAD--GTFSTSPNQL 253
+FKDD++CS IAE LDPDGKISPAQISN LK+LGLA+APR+KM DAD G STSPNQL
Sbjct: 861 KFKDDQHCSHRIAEVLDPDGKISPAQISNMLKRLGLAVAPRRKMCDADAEGPLSTSPNQL 920
Query: 254 EGDEIAGVANHKSANLEGSLLVQHQQKRKRVRAFNEDQEALIKVLYEQFKDHRRCSYMIA 433
+ D+I G NHKS NLEGSLLVQH QK+KRV+AFN+DQEALIKVLYEQFKD RRCSYMIA
Sbjct: 921 DSDKITGATNHKSVNLEGSLLVQHLQKKKRVQAFNKDQEALIKVLYEQFKDQRRCSYMIA 980
Query: 434 NALDVDGKFTPAQVSRKLKQLGLSVPQKSFGGKMHPKGEDLIDHSKDRMNESDDETLISL 613
NALD DGKFT AQVSRKLKQLGLS+P KS GGKMHPKG DL+D S +RM+ESDDETL+SL
Sbjct: 981 NALDKDGKFTTAQVSRKLKQLGLSLPLKSSGGKMHPKGADLMDRSNERMDESDDETLVSL 1040
Query: 614 IERKK 628
++RKK
Sbjct: 1041 VKRKK 1045
Score = 65.5 bits (158), Expect = 8e-09
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 DEIAGVANHKSANLEGSLLVQHQQ----KRKRVRAFNEDQEALIKVLYEQFKDHRRCSYM 427
DE V H S G L++ + +R++ + D E IK L+E+FKD + CS+
Sbjct: 812 DEADVVITHDSGYQNGEQLMEDESQIAPRRRKKLVLDGDLERQIKDLHEKFKDDQHCSHR 871
Query: 428 IANALDVDGKFTPAQVSRKLKQLGLSV 508
IA LD DGK +PAQ+S LK+LGL+V
Sbjct: 872 IAEVLDPDGKISPAQISNMLKRLGLAV 898
>ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago truncatula]
gi|355481207|gb|AES62410.1| Topoisomerase 1-associated
factor [Medicago truncatula]
Length = 1335
Score = 286 bits (732), Expect = 2e-75
Identities = 147/185 (79%), Positives = 160/185 (86%)
Frame = +2
Query: 74 YIRFKDDRNCSRCIAEALDPDGKISPAQISNKLKKLGLAIAPRKKMGDADGTFSTSPNQL 253
Y +FKDDRNCSR IAE LDPDGKIS AQIS+KLKKLGL IA RKK GDAD TFSTSPNQL
Sbjct: 955 YEKFKDDRNCSRRIAEVLDPDGKISTAQISSKLKKLGLTIASRKKKGDADETFSTSPNQL 1014
Query: 254 EGDEIAGVANHKSANLEGSLLVQHQQKRKRVRAFNEDQEALIKVLYEQFKDHRRCSYMIA 433
EG +AG NH S +EGSLL+QH+QKRKRV AFNEDQEA IKVL+E FKDHRRCSYMIA
Sbjct: 1015 EGGGLAGGVNHTS--VEGSLLIQHRQKRKRVSAFNEDQEARIKVLFEDFKDHRRCSYMIA 1072
Query: 434 NALDVDGKFTPAQVSRKLKQLGLSVPQKSFGGKMHPKGEDLIDHSKDRMNESDDETLISL 613
NALD DGKFTPAQVSRKLKQLGL VPQKSF GK H KGEDL+D S DRM+ESD++TLISL
Sbjct: 1073 NALDKDGKFTPAQVSRKLKQLGLCVPQKSFRGKNHQKGEDLMDGSNDRMHESDEDTLISL 1132
Query: 614 IERKK 628
++RKK
Sbjct: 1133 VKRKK 1137
Score = 67.0 bits (162), Expect = 3e-09
Identities = 41/109 (37%), Positives = 62/109 (56%)
Frame = +2
Query: 203 KKMGDADGTFSTSPNQLEGDEIAGVANHKSANLEGSLLVQHQQKRKRVRAFNEDQEALIK 382
+K+ D +G STS ++ + D+ N+ LE ++K+K + + + E IK
Sbjct: 900 EKLDDIEGIASTSGSKNDRDD-----NNGEPWLEDEYQTAPRRKKKLI--LDAELEIQIK 952
Query: 383 VLYEQFKDHRRCSYMIANALDVDGKFTPAQVSRKLKQLGLSVPQKSFGG 529
LYE+FKD R CS IA LD DGK + AQ+S KLK+LGL++ + G
Sbjct: 953 DLYEKFKDDRNCSRRIAEVLDPDGKISTAQISSKLKKLGLTIASRKKKG 1001
>ref|XP_003535579.1| PREDICTED: uncharacterized protein LOC100785399 [Glycine max]
Length = 1042
Score = 280 bits (715), Expect = 2e-73
Identities = 144/185 (77%), Positives = 161/185 (87%), Gaps = 2/185 (1%)
Frame = +2
Query: 74 YIRFKDDRNCSRCIAEALDPDGKISPAQISNKLKKLGLAIAPRKKMGDAD--GTFSTSPN 247
Y +FKD+ +CSR IAE LDPDGKISPAQISN LK+LGLA+AP++KMGDAD G STSPN
Sbjct: 860 YEKFKDEPHCSRHIAEVLDPDGKISPAQISNMLKRLGLAVAPKRKMGDADAEGHLSTSPN 919
Query: 248 QLEGDEIAGVANHKSANLEGSLLVQHQQKRKRVRAFNEDQEALIKVLYEQFKDHRRCSYM 427
QL+GD+ A NHKS NLEGSLLVQH QK+KRV+AFNE QEALIKVLYEQFKDHRRCSYM
Sbjct: 920 QLDGDKRA--TNHKSVNLEGSLLVQHLQKKKRVQAFNEAQEALIKVLYEQFKDHRRCSYM 977
Query: 428 IANALDVDGKFTPAQVSRKLKQLGLSVPQKSFGGKMHPKGEDLIDHSKDRMNESDDETLI 607
IANALD DGK T AQVSRKLKQLGLS+PQKS GGKMHPK DL+D S DR+NESDDETL+
Sbjct: 978 IANALDEDGKITAAQVSRKLKQLGLSLPQKSSGGKMHPKDADLMDLSNDRINESDDETLV 1037
Query: 608 SLIER 622
+LI+R
Sbjct: 1038 TLIKR 1042
Score = 66.2 bits (160), Expect = 5e-09
Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Frame = +2
Query: 260 DEIAGVANHKSANLEGSLLVQHQQ----KRKRVRAFNEDQEALIKVLYEQFKDHRRCSYM 427
DE V H S G L++ + +R++ + D E IK LYE+FKD CS
Sbjct: 813 DEADVVITHDSRCQHGEQLMEDESQLAPRRRKKLVLDGDLERQIKDLYEKFKDEPHCSRH 872
Query: 428 IANALDVDGKFTPAQVSRKLKQLGLSVPQKSFGGKMHPKGE-----DLIDHSKDRMNES- 589
IA LD DGK +PAQ+S LK+LGL+V K G +G + +D K N
Sbjct: 873 IAEVLDPDGKISPAQISNMLKRLGLAVAPKRKMGDADAEGHLSTSPNQLDGDKRATNHKS 932
Query: 590 ---DDETLISLIERKK 628
+ L+ +++KK
Sbjct: 933 VNLEGSLLVQHLQKKK 948
>emb|CBI22579.3| unnamed protein product [Vitis vinifera]
Length = 1217
Score = 189 bits (480), Expect = 4e-46
Identities = 109/192 (56%), Positives = 132/192 (68%), Gaps = 7/192 (3%)
Frame = +2
Query: 74 YIRFKDDRNCSRCIAEALDPDGKISPAQISNKLKKLGLAIAPRKKMGDADGTFSTSPNQL 253
Y +FKDDR+CSR IAEALDPD K+SP Q+SNKLK+LGL IAP+K+M D S S NQL
Sbjct: 923 YEKFKDDRHCSRLIAEALDPDCKVSPVQVSNKLKQLGLKIAPKKRMLQVDVPLSDSTNQL 982
Query: 254 EGDEIAGVANHKSANL------EGSLLVQHQQKRKRVRAFNEDQEALIKVLYEQFKDHRR 415
E A +SA+L EGSL+ + RKRVRAF++DQE I+ LYEQFK H+R
Sbjct: 983 M--EEARAVGEESAHLVCSNNSEGSLVRKSLHTRKRVRAFSKDQEETIRALYEQFKGHKR 1040
Query: 416 CSYMIANALDVDGKFTPAQVSRKLKQLGLSVP-QKSFGGKMHPKGEDLIDHSKDRMNESD 592
C+YMIA+AL D T AQVSRKLKQLGL VP +K G MH + EDL D + +SD
Sbjct: 1041 CTYMIASALAGDDILTAAQVSRKLKQLGLHVPRRKRAEGNMHLRDEDLNDFDTAKAQDSD 1100
Query: 593 DETLISLIERKK 628
DETL+SL +R K
Sbjct: 1101 DETLLSLRKRSK 1112
Score = 68.9 bits (167), Expect = 8e-10
Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Frame = +2
Query: 221 DGTFSTSPNQLEG----DEIAGVANHKSANLEGSLLVQHQQKRKRVRAFNEDQEALIKVL 388
+G S ++++G D + A H+S + KRKR + + E IK L
Sbjct: 872 EGVTPISSSKIDGKTNSDNVGHYAEHESERVS---------KRKRRLVLSAEVEKNIKDL 922
Query: 389 YEQFKDHRRCSYMIANALDVDGKFTPAQVSRKLKQLGLSVPQK 517
YE+FKD R CS +IA ALD D K +P QVS KLKQLGL + K
Sbjct: 923 YEKFKDDRHCSRLIAEALDPDCKVSPVQVSNKLKQLGLKIAPK 965
>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
Length = 1269
Score = 189 bits (480), Expect = 4e-46
Identities = 109/192 (56%), Positives = 132/192 (68%), Gaps = 7/192 (3%)
Frame = +2
Query: 74 YIRFKDDRNCSRCIAEALDPDGKISPAQISNKLKKLGLAIAPRKKMGDADGTFSTSPNQL 253
Y +FKDDR+CSR IAEALDPD K+SP Q+SNKLK+LGL IAP+K+M D S S NQL
Sbjct: 914 YEKFKDDRHCSRLIAEALDPDCKVSPVQVSNKLKQLGLKIAPKKRMLQVDVPLSDSTNQL 973
Query: 254 EGDEIAGVANHKSANL------EGSLLVQHQQKRKRVRAFNEDQEALIKVLYEQFKDHRR 415
E A +SA+L EGSL+ + RKRVRAF++DQE I+ LYEQFK H+R
Sbjct: 974 M--EEARAVGEESAHLVCSNNSEGSLVRKSLHTRKRVRAFSKDQEETIRALYEQFKGHKR 1031
Query: 416 CSYMIANALDVDGKFTPAQVSRKLKQLGLSVP-QKSFGGKMHPKGEDLIDHSKDRMNESD 592
C+YMIA+AL D T AQVSRKLKQLGL VP +K G MH + EDL D + +SD
Sbjct: 1032 CTYMIASALAGDDILTAAQVSRKLKQLGLHVPRRKRAEGNMHLRDEDLNDFDTAKAQDSD 1091
Query: 593 DETLISLIERKK 628
DETL+SL +R K
Sbjct: 1092 DETLLSLRKRSK 1103
Score = 67.0 bits (162), Expect = 3e-09
Identities = 39/94 (41%), Positives = 52/94 (55%)
Frame = +2
Query: 236 TSPNQLEGDEIAGVANHKSANLEGSLLVQHQQKRKRVRAFNEDQEALIKVLYEQFKDHRR 415
T+ ++ + + A H+S + KRKR + + E IK LYE+FKD R
Sbjct: 872 TNSDKYDVQHVGHYAEHESERVS---------KRKRRLVLSAEVEKNIKDLYEKFKDDRH 922
Query: 416 CSYMIANALDVDGKFTPAQVSRKLKQLGLSVPQK 517
CS +IA ALD D K +P QVS KLKQLGL + K
Sbjct: 923 CSRLIAEALDPDCKVSPVQVSNKLKQLGLKIAPK 956