BLASTX nr result

ID: Glycyrrhiza23_contig00030727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030727
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   119   2e-25
ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   119   2e-25
ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago tr...   112   2e-23
ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   107   1e-21

>ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
           max]
          Length = 743

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/79 (77%), Positives = 66/79 (83%)
 Frame = -3

Query: 241 SLKDTEDISMHEVYVTTTPTLLKQIGMVVPLEQKLDMLWNFIKTHLHSKILVFFSSYKQV 62
           SLKD E +S+HE  VT+TPTLLKQI M+VPLEQKLDMLW+FIKTHL SK LVF SS KQV
Sbjct: 265 SLKDPEYLSVHEESVTSTPTLLKQIVMIVPLEQKLDMLWSFIKTHLQSKTLVFLSSCKQV 324

Query: 61  KFEFEAFSKLHHGILLKCL 5
           KF FEAF KLH GI LKCL
Sbjct: 325 KFVFEAFKKLHPGIPLKCL 343


>ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
           max]
          Length = 746

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/79 (77%), Positives = 66/79 (83%)
 Frame = -3

Query: 241 SLKDTEDISMHEVYVTTTPTLLKQIGMVVPLEQKLDMLWNFIKTHLHSKILVFFSSYKQV 62
           SLKD E +S+HE  VT+TPTLLKQI M+VPLEQKLDMLW+FIKTHL SK LVF SS KQV
Sbjct: 266 SLKDPEYLSVHEESVTSTPTLLKQIVMIVPLEQKLDMLWSFIKTHLQSKTLVFLSSCKQV 325

Query: 61  KFEFEAFSKLHHGILLKCL 5
           KF FEAF KLH GI LKCL
Sbjct: 326 KFVFEAFKKLHPGIPLKCL 344


>ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago truncatula]
           gi|355518859|gb|AET00483.1| ATP-dependent RNA helicase
           DBP4 [Medicago truncatula]
          Length = 747

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/79 (73%), Positives = 61/79 (77%)
 Frame = -3

Query: 241 SLKDTEDISMHEVYVTTTPTLLKQIGMVVPLEQKLDMLWNFIKTHLHSKILVFFSSYKQV 62
           SLKD E IS+HE  VT TPTLLKQ  M+VPL+QKLDMLW FIK HL SK LVF SS KQV
Sbjct: 274 SLKDPEYISVHEESVTATPTLLKQTVMIVPLDQKLDMLWTFIKRHLQSKTLVFLSSCKQV 333

Query: 61  KFEFEAFSKLHHGILLKCL 5
           KF FE F KLH GI LKCL
Sbjct: 334 KFVFEVFKKLHPGIPLKCL 352


>ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|222858220|gb|EEE95767.1|
           predicted protein [Populus trichocarpa]
          Length = 766

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/79 (69%), Positives = 62/79 (78%)
 Frame = -3

Query: 241 SLKDTEDISMHEVYVTTTPTLLKQIGMVVPLEQKLDMLWNFIKTHLHSKILVFFSSYKQV 62
           SLKD E IS+HE   T TP+ L+Q  M+VPLEQKLDMLW+F+K HL+SKILVF SS KQV
Sbjct: 267 SLKDPEYISVHEDAETATPSRLQQTAMIVPLEQKLDMLWSFVKAHLNSKILVFLSSCKQV 326

Query: 61  KFEFEAFSKLHHGILLKCL 5
           KF FEAF KL  GI LKCL
Sbjct: 327 KFVFEAFKKLRPGIPLKCL 345


>ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
           sativus]
          Length = 734

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/79 (69%), Positives = 60/79 (75%)
 Frame = -3

Query: 241 SLKDTEDISMHEVYVTTTPTLLKQIGMVVPLEQKLDMLWNFIKTHLHSKILVFFSSYKQV 62
           SLKD E +S+HE   T TP  L+Q  MVVPLEQKLDMLW+FIK HL+SKILVF SS KQV
Sbjct: 266 SLKDPEYLSVHEESTTATPNSLQQTAMVVPLEQKLDMLWSFIKAHLNSKILVFLSSCKQV 325

Query: 61  KFEFEAFSKLHHGILLKCL 5
           KF FE F KL  GI LKCL
Sbjct: 326 KFVFETFKKLRPGIPLKCL 344


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