BLASTX nr result

ID: Glycyrrhiza23_contig00030723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030723
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616526.1| Rop guanine nucleotide exchange factor [Medi...   231   6e-59
ref|XP_003519370.1| PREDICTED: rop guanine nucleotide exchange f...   225   3e-57
ref|XP_003545244.1| PREDICTED: LOW QUALITY PROTEIN: rop guanine ...   225   3e-57
ref|XP_003552856.1| PREDICTED: rop guanine nucleotide exchange f...   219   2e-55
ref|XP_003538433.1| PREDICTED: rop guanine nucleotide exchange f...   218   4e-55

>ref|XP_003616526.1| Rop guanine nucleotide exchange factor [Medicago truncatula]
           gi|332688629|gb|AEE89667.1| RopGEF6 [Medicago
           truncatula] gi|355517861|gb|AES99484.1| Rop guanine
           nucleotide exchange factor [Medicago truncatula]
          Length = 576

 Score =  231 bits (588), Expect = 6e-59
 Identities = 111/141 (78%), Positives = 119/141 (84%), Gaps = 9/141 (6%)
 Frame = +2

Query: 2   SNSDEKENEPISQLGDKKMPGV---------DKMKERFAKLLLGEDMSGCGKGVCTAMAI 154
           S SDEKENEP+SQ+ DKK+  +         D MKERFAKLLLGEDMSG GKGV TA+AI
Sbjct: 53  SKSDEKENEPVSQVDDKKVTSISSKISGSGGDMMKERFAKLLLGEDMSGSGKGVSTALAI 112

Query: 155 SNAITNLCATVFGQLWRLEPLPCEKKAMWQREMDWLLCVSDHIVELMPSWQTFPDGSKHE 334
           SNAITNLC TVFGQLWRLEP+PCEKK  WQREMDWLLCV DHIVELMPSWQT+PDGSK E
Sbjct: 113 SNAITNLCGTVFGQLWRLEPVPCEKKEKWQREMDWLLCVGDHIVELMPSWQTYPDGSKQE 172

Query: 335 VMTCMPRSDLFINLPALRKLD 397
           VMTC PRSD+FINLPALRKLD
Sbjct: 173 VMTCRPRSDIFINLPALRKLD 193


>ref|XP_003519370.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine
           max]
          Length = 559

 Score =  225 bits (574), Expect = 3e-57
 Identities = 109/139 (78%), Positives = 118/139 (84%), Gaps = 9/139 (6%)
 Frame = +2

Query: 8   SDEKENEPISQLGDKKMP---------GVDKMKERFAKLLLGEDMSGCGKGVCTAMAISN 160
           SDEKENEP+S L D K           G+D MKERFAKLLLGEDMSG GKGVC+A+AISN
Sbjct: 49  SDEKENEPVSHLEDSKFTTVSSKMSGNGIDAMKERFAKLLLGEDMSGSGKGVCSALAISN 108

Query: 161 AITNLCATVFGQLWRLEPLPCEKKAMWQREMDWLLCVSDHIVELMPSWQTFPDGSKHEVM 340
           AITNLCATVFGQLWRLEP+PCEKK MW+REM+WLL VSDHIVEL+PSWQTFPDGSK EVM
Sbjct: 109 AITNLCATVFGQLWRLEPIPCEKKEMWRREMEWLLSVSDHIVELIPSWQTFPDGSKLEVM 168

Query: 341 TCMPRSDLFINLPALRKLD 397
           TC PRSDLF+NLPAL KLD
Sbjct: 169 TCRPRSDLFMNLPALHKLD 187


>ref|XP_003545244.1| PREDICTED: LOW QUALITY PROTEIN: rop guanine nucleotide exchange
           factor 1-like [Glycine max]
          Length = 565

 Score =  225 bits (573), Expect = 3e-57
 Identities = 110/137 (80%), Positives = 119/137 (86%), Gaps = 7/137 (5%)
 Frame = +2

Query: 8   SDEKENEPISQLGDKK-------MPGVDKMKERFAKLLLGEDMSGCGKGVCTAMAISNAI 166
           SDEKENEP+S L D K       M G+D MKERFAKLLLGEDMSG GKGVC+A+AISNAI
Sbjct: 52  SDEKENEPVSHLEDSKFTTVSSKMSGIDAMKERFAKLLLGEDMSGSGKGVCSALAISNAI 111

Query: 167 TNLCATVFGQLWRLEPLPCEKKAMWQREMDWLLCVSDHIVELMPSWQTFPDGSKHEVMTC 346
           TNLCATVFGQLWRLEP+PCEKK MW+REM+ LL VSDHIVEL+PSWQTFPDGSK EVMTC
Sbjct: 112 TNLCATVFGQLWRLEPIPCEKKEMWRREMECLLSVSDHIVELIPSWQTFPDGSKLEVMTC 171

Query: 347 MPRSDLFINLPALRKLD 397
            PRSDLF+NLPALRKLD
Sbjct: 172 RPRSDLFMNLPALRKLD 188


>ref|XP_003552856.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine
           max]
          Length = 593

 Score =  219 bits (557), Expect = 2e-55
 Identities = 109/139 (78%), Positives = 117/139 (84%), Gaps = 7/139 (5%)
 Frame = +2

Query: 2   SNSDEKENEPISQLGDKKMPG-------VDKMKERFAKLLLGEDMSGCGKGVCTAMAISN 160
           SNSDEKEN+  S L DKK          VD MKERFAKLLLGEDMSG GKGVCTA+AISN
Sbjct: 69  SNSDEKENKHKSHLEDKKFTSIALKLSEVDMMKERFAKLLLGEDMSGSGKGVCTALAISN 128

Query: 161 AITNLCATVFGQLWRLEPLPCEKKAMWQREMDWLLCVSDHIVELMPSWQTFPDGSKHEVM 340
           AITNLCATVFGQLWRLEPLP EKK MWQREM+WL+ VSD+IVELMPSWQT+PDGSK EVM
Sbjct: 129 AITNLCATVFGQLWRLEPLPSEKKEMWQREMEWLVSVSDYIVELMPSWQTYPDGSKLEVM 188

Query: 341 TCMPRSDLFINLPALRKLD 397
           TC PR+D+F NLPALRKLD
Sbjct: 189 TCRPRADIFTNLPALRKLD 207


>ref|XP_003538433.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine
           max]
          Length = 598

 Score =  218 bits (555), Expect = 4e-55
 Identities = 108/139 (77%), Positives = 117/139 (84%), Gaps = 7/139 (5%)
 Frame = +2

Query: 2   SNSDEKENEPISQLGDKKMPGV-------DKMKERFAKLLLGEDMSGCGKGVCTAMAISN 160
           S+SDEKEN   S L DKK   +       D MKERFAKLLLGEDMSG GKGVCTA+AISN
Sbjct: 71  SSSDEKENRHKSHLEDKKFTSIGLKLSELDMMKERFAKLLLGEDMSGSGKGVCTALAISN 130

Query: 161 AITNLCATVFGQLWRLEPLPCEKKAMWQREMDWLLCVSDHIVELMPSWQTFPDGSKHEVM 340
           AITNLCATVFGQLWRLEPLP EKK MWQREM+WL+ VSD+IVELMPSWQT+PDGSK EVM
Sbjct: 131 AITNLCATVFGQLWRLEPLPSEKKEMWQREMEWLVSVSDYIVELMPSWQTYPDGSKLEVM 190

Query: 341 TCMPRSDLFINLPALRKLD 397
           TC PR+D+FINLPALRKLD
Sbjct: 191 TCRPRADIFINLPALRKLD 209


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