BLASTX nr result
ID: Glycyrrhiza23_contig00030682
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00030682 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003636489.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 77 1e-12 ref|XP_003624849.1| F-box/LRR-repeat protein [Medicago truncatul... 75 4e-12 gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [... 74 9e-12 ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatul... 72 5e-11 ref|XP_003589973.1| F-box/LRR-repeat protein [Medicago truncatul... 72 5e-11 >ref|XP_003636489.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355502424|gb|AES83627.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 752 Score = 77.0 bits (188), Expect = 1e-12 Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 2/91 (2%) Frame = +3 Query: 6 VNDLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKDLGVVGYESFLPR--K 179 +N +PFVD PLLK LHL+ V F Y + LLS CP+LE+LE+KD+ +V + R + Sbjct: 240 LNQVPFVDLPLLKVLHLESVSFTYYWYITTLLSGCPVLEELEAKDV-IVTRRCMVIRTGR 298 Query: 180 EVKRLTNLVRANICDQHIPFTSLYNAEFLHV 272 EV L+NLVRANI + + F LYN L + Sbjct: 299 EVLNLSNLVRANISNGLLEFDWLYNVNLLRI 329 Score = 60.8 bits (146), Expect = 1e-07 Identities = 42/109 (38%), Positives = 54/109 (49%), Gaps = 19/109 (17%) Frame = +3 Query: 6 VNDLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKD------LGVVG---- 155 +N++PFVD P LK LHL+ V F E L KLLS+CPILE LE+ D V+G Sbjct: 149 LNEVPFVDLPSLKVLHLESVTFTCPEYLMKLLSSCPILEKLEANDSITTTFFKVIGRDRG 208 Query: 156 -------YESFLPR--KEVKRLTNLVRANICDQHIPFTSLYNAEFLHVD 275 E+ LP K LT L I +PF L + LH++ Sbjct: 209 EFIKCRYSETILPSFILTTKTLTQLKLKRITLNQVPFVDLPLLKVLHLE 257 >ref|XP_003624849.1| F-box/LRR-repeat protein [Medicago truncatula] gi|87162852|gb|ABD28647.1| Cyclin-like F-box; FBD; Zinc finger, FYVE/PHD-type [Medicago truncatula] gi|355499864|gb|AES81067.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 481 Score = 75.5 bits (184), Expect = 4e-12 Identities = 43/87 (49%), Positives = 55/87 (63%) Frame = +3 Query: 6 VNDLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKDLGVVGYESFLPRKEV 185 +N++PFV+ P LK L+LD V F YE + KLLS CPIL+ L + +L V E + V Sbjct: 247 LNEVPFVNLPSLKALYLDVVTFTYYELILKLLSGCPILQYLGTNNLVV---ELPYSERPV 303 Query: 186 KRLTNLVRANICDQHIPFTSLYNAEFL 266 L+NL+RANICD HI F L N E L Sbjct: 304 ISLSNLIRANICDIHIEFDWLQNVERL 330 >gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago truncatula] Length = 1116 Score = 74.3 bits (181), Expect = 9e-12 Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 2/89 (2%) Frame = +3 Query: 6 VNDLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKDLGVVGYESFLPRKE- 182 +N++ V+ P LK L+LD V F YE + KLLS CPIL+DL + DL V LP E Sbjct: 193 LNEVTCVNLPSLKALYLDVVTFTYYEYILKLLSGCPILQDLGANDLRVE-----LPYSEG 247 Query: 183 -VKRLTNLVRANICDQHIPFTSLYNAEFL 266 V L+NL+RANICD HI F L N E L Sbjct: 248 RVISLSNLIRANICDIHIEFDWLQNVERL 276 >ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355479043|gb|AES60246.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 450 Score = 72.0 bits (175), Expect = 5e-11 Identities = 42/87 (48%), Positives = 53/87 (60%) Frame = +3 Query: 12 DLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKDLGVVGYESFLPRKEVKR 191 D+P V P LK LHL+ V F +E + KLLS CPIL +LE+KDL + Y L R V Sbjct: 220 DVPHVHLPSLKVLHLEHVTFGYFEYITKLLSGCPILNELETKDLFIEQYSRVL-RVVVLS 278 Query: 192 LTNLVRANICDQHIPFTSLYNAEFLHV 272 L NLVRANI D I + L+ A+ L + Sbjct: 279 LPNLVRANISDDLIRYDWLHMAQHLRI 305 >ref|XP_003589973.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355479021|gb|AES60224.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 485 Score = 72.0 bits (175), Expect = 5e-11 Identities = 42/87 (48%), Positives = 53/87 (60%) Frame = +3 Query: 12 DLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKDLGVVGYESFLPRKEVKR 191 D+P V P LK LHL+ V F +E + KLLS CPIL +LE+KDL + Y L R V Sbjct: 220 DVPHVHLPSLKVLHLEHVTFGYFEYITKLLSGCPILNELETKDLFIEQYSRVL-RVVVLS 278 Query: 192 LTNLVRANICDQHIPFTSLYNAEFLHV 272 L NLVRANI D I + L+ A+ L + Sbjct: 279 LPNLVRANISDDLIRYDWLHMAQHLRI 305