BLASTX nr result

ID: Glycyrrhiza23_contig00030682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030682
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636489.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    77   1e-12
ref|XP_003624849.1| F-box/LRR-repeat protein [Medicago truncatul...    75   4e-12
gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...    74   9e-12
ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatul...    72   5e-11
ref|XP_003589973.1| F-box/LRR-repeat protein [Medicago truncatul...    72   5e-11

>ref|XP_003636489.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355502424|gb|AES83627.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 752

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
 Frame = +3

Query: 6   VNDLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKDLGVVGYESFLPR--K 179
           +N +PFVD PLLK LHL+ V F  Y  +  LLS CP+LE+LE+KD+ +V     + R  +
Sbjct: 240 LNQVPFVDLPLLKVLHLESVSFTYYWYITTLLSGCPVLEELEAKDV-IVTRRCMVIRTGR 298

Query: 180 EVKRLTNLVRANICDQHIPFTSLYNAEFLHV 272
           EV  L+NLVRANI +  + F  LYN   L +
Sbjct: 299 EVLNLSNLVRANISNGLLEFDWLYNVNLLRI 329



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/109 (38%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
 Frame = +3

Query: 6   VNDLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKD------LGVVG---- 155
           +N++PFVD P LK LHL+ V F   E L KLLS+CPILE LE+ D        V+G    
Sbjct: 149 LNEVPFVDLPSLKVLHLESVTFTCPEYLMKLLSSCPILEKLEANDSITTTFFKVIGRDRG 208

Query: 156 -------YESFLPR--KEVKRLTNLVRANICDQHIPFTSLYNAEFLHVD 275
                   E+ LP      K LT L    I    +PF  L   + LH++
Sbjct: 209 EFIKCRYSETILPSFILTTKTLTQLKLKRITLNQVPFVDLPLLKVLHLE 257


>ref|XP_003624849.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|87162852|gb|ABD28647.1| Cyclin-like F-box; FBD; Zinc
           finger, FYVE/PHD-type [Medicago truncatula]
           gi|355499864|gb|AES81067.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 481

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/87 (49%), Positives = 55/87 (63%)
 Frame = +3

Query: 6   VNDLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKDLGVVGYESFLPRKEV 185
           +N++PFV+ P LK L+LD V F  YE + KLLS CPIL+ L + +L V   E     + V
Sbjct: 247 LNEVPFVNLPSLKALYLDVVTFTYYELILKLLSGCPILQYLGTNNLVV---ELPYSERPV 303

Query: 186 KRLTNLVRANICDQHIPFTSLYNAEFL 266
             L+NL+RANICD HI F  L N E L
Sbjct: 304 ISLSNLIRANICDIHIEFDWLQNVERL 330


>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +3

Query: 6   VNDLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKDLGVVGYESFLPRKE- 182
           +N++  V+ P LK L+LD V F  YE + KLLS CPIL+DL + DL V      LP  E 
Sbjct: 193 LNEVTCVNLPSLKALYLDVVTFTYYEYILKLLSGCPILQDLGANDLRVE-----LPYSEG 247

Query: 183 -VKRLTNLVRANICDQHIPFTSLYNAEFL 266
            V  L+NL+RANICD HI F  L N E L
Sbjct: 248 RVISLSNLIRANICDIHIEFDWLQNVERL 276


>ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355479043|gb|AES60246.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 450

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/87 (48%), Positives = 53/87 (60%)
 Frame = +3

Query: 12  DLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKDLGVVGYESFLPRKEVKR 191
           D+P V  P LK LHL+ V F  +E + KLLS CPIL +LE+KDL +  Y   L R  V  
Sbjct: 220 DVPHVHLPSLKVLHLEHVTFGYFEYITKLLSGCPILNELETKDLFIEQYSRVL-RVVVLS 278

Query: 192 LTNLVRANICDQHIPFTSLYNAEFLHV 272
           L NLVRANI D  I +  L+ A+ L +
Sbjct: 279 LPNLVRANISDDLIRYDWLHMAQHLRI 305


>ref|XP_003589973.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355479021|gb|AES60224.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 485

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/87 (48%), Positives = 53/87 (60%)
 Frame = +3

Query: 12  DLPFVDFPLLKTLHLDCVIFESYECLQKLLSACPILEDLESKDLGVVGYESFLPRKEVKR 191
           D+P V  P LK LHL+ V F  +E + KLLS CPIL +LE+KDL +  Y   L R  V  
Sbjct: 220 DVPHVHLPSLKVLHLEHVTFGYFEYITKLLSGCPILNELETKDLFIEQYSRVL-RVVVLS 278

Query: 192 LTNLVRANICDQHIPFTSLYNAEFLHV 272
           L NLVRANI D  I +  L+ A+ L +
Sbjct: 279 LPNLVRANISDDLIRYDWLHMAQHLRI 305


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