BLASTX nr result

ID: Glycyrrhiza23_contig00030678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030678
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545424.1| PREDICTED: U-box domain-containing protein 3...   132   3e-29
ref|XP_003549319.1| PREDICTED: U-box domain-containing protein 5...   115   5e-24
ref|XP_003588906.1| U-box domain-containing protein [Medicago tr...   107   1e-21
ref|XP_003603171.1| U-box domain-containing protein [Medicago tr...    74   2e-11
ref|XP_004167209.1| PREDICTED: U-box domain-containing protein 5...    69   3e-10

>ref|XP_003545424.1| PREDICTED: U-box domain-containing protein 35-like [Glycine max]
          Length = 860

 Score =  132 bits (332), Expect = 3e-29
 Identities = 79/158 (50%), Positives = 97/158 (61%)
 Frame = +1

Query: 1   YAQRNRIQTIVVGAPSSNKNALSLTRSLNMRSGSKKFKSHDKVPKAIIKSAPDYASIYVI 180
           YAQRNR+ TIVVGAP S++N L+  R+LN+RSGSKKFK H  V   ++KSAPDY+S+YVI
Sbjct: 104 YAQRNRVNTIVVGAPHSSRNTLA--RTLNLRSGSKKFKGHHDVSTGVMKSAPDYSSVYVI 161

Query: 181 SKGKIVKTRPAISPLENLVAQPKQPLGLAYCGSQNGARTQTFXXXXXXXXXXXXXLYETP 360
           SKGKIV  RPAI P+ N+V   K          +NG RT +              L E P
Sbjct: 162 SKGKIVGARPAIRPMINVVPSQK----------ENGVRTYSHRRGSTNGRSERSALLEMP 211

Query: 361 RCSSASQSMDNIDLSYRRQRSHNSRWIIESNSSGSHKF 474
           RCSSA Q+M+      R   SH S +   S+SSGSHKF
Sbjct: 212 RCSSAGQTMNQ-----RSLFSHTSGY---SDSSGSHKF 241


>ref|XP_003549319.1| PREDICTED: U-box domain-containing protein 52-like [Glycine max]
          Length = 642

 Score =  115 bits (287), Expect = 5e-24
 Identities = 73/152 (48%), Positives = 89/152 (58%)
 Frame = +1

Query: 1   YAQRNRIQTIVVGAPSSNKNALSLTRSLNMRSGSKKFKSHDKVPKAIIKSAPDYASIYVI 180
           YAQRNR+ TIVVGA  S K+ L+  R+LN+RSGSKK K H  V   ++KSAPDY+S+YVI
Sbjct: 104 YAQRNRVNTIVVGATHSCKSTLA--RTLNLRSGSKKCKGHHDVSTGVMKSAPDYSSVYVI 161

Query: 181 SKGKIVKTRPAISPLENLVAQPKQPLGLAYCGSQNGARTQTFXXXXXXXXXXXXXLYETP 360
           SKGKIV  RPAI P+ N+VA PK          +N  RT +              L E P
Sbjct: 162 SKGKIVGARPAIRPMINVVAPPK----------ENVVRTHSHRRGSTNGRSERSTLLEMP 211

Query: 361 RCSSASQSMDNIDLSYRRQRSHNSRWIIESNS 456
           RCSSA QS +        QRS  S   +ES+S
Sbjct: 212 RCSSAGQSTN--------QRSLFSPSSVESDS 235


>ref|XP_003588906.1| U-box domain-containing protein [Medicago truncatula]
           gi|355477954|gb|AES59157.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 712

 Score =  107 bits (266), Expect = 1e-21
 Identities = 70/170 (41%), Positives = 100/170 (58%), Gaps = 12/170 (7%)
 Frame = +1

Query: 1   YAQRNRIQTIVVGAPSSNKNALSLTRSLNMRSGSKKFKSHDKVPKAIIKSAPDYASIYVI 180
           YA+RN IQTI+VGAP+  K   S    ++     KKF+  D +  AI+KSAPDY+S+YVI
Sbjct: 100 YAKRNHIQTIIVGAPTGYKKNSSF--KVSKHEDYKKFRGQDDLATAIMKSAPDYSSVYVI 157

Query: 181 SKGKIVKTRPAISPLENLVAQPKQPLGLAYCGSQNGARTQTFXXXXXXXXXXXXXLYETP 360
           SK K+V++RPAI PL  +VAQ     G+A C S+N   +Q +             ++E  
Sbjct: 158 SKDKVVESRPAIVPLGTVVAQSH---GIAPCKSENDKWSQLYRRGSTNSRSGRSSIHEFI 214

Query: 361 RCSSA--------SQSMDNIDLSYRRQR----SHNSRWIIESNSSGSHKF 474
           +  S+        ++S+++IDLS R QR    SHNS  + E+ SSGS+KF
Sbjct: 215 KSFSSNNNNNNHNNESLESIDLSSRSQRTPPLSHNSS-LNENGSSGSNKF 263


>ref|XP_003603171.1| U-box domain-containing protein [Medicago truncatula]
           gi|355492219|gb|AES73422.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 720

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
 Frame = +1

Query: 1   YAQRNRIQTIVVGAPSSNKNALSLTRSLNMRSGSKKFKSHDKVPKAIIKSAPDYASIYVI 180
           +A RN + ++V+GA + N           +    KKFK+   +P +IIKSAP Y S+Y+I
Sbjct: 116 FANRNLVHSLVIGASTKN-----------LMPSLKKFKASQDIPTSIIKSAPGYCSVYII 164

Query: 181 SKGKIVKTRPAISPLENLVAQPKQ--------------PLGLAYCGSQNGARTQTFXXXX 318
           SK KIV TRPA+  + N +   KQ               +     G+  G+ +++F    
Sbjct: 165 SKLKIVSTRPAVREIGNQIIPTKQLAVQVSPEFESGIRSIQPRTSGTNEGSESRSFDSIS 224

Query: 319 XXXXXXXXXLYETPRCSSASQSMDNIDLSYRRQR 420
                      + PR + ++QSMDNID S  R R
Sbjct: 225 TVKGPAR----DRPRSAGSNQSMDNIDPSGGRGR 254


>ref|XP_004167209.1| PREDICTED: U-box domain-containing protein 51-like [Cucumis
           sativus]
          Length = 732

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
 Frame = +1

Query: 1   YAQRNRIQTIVVGAPSSNKNALSLTRSLNMRSGSKKFKSHDKVPKAIIKSAPDYASIYVI 180
           Y  +N I + VVGA  S ++AL+           +KFK+ D VP +IIK+AP++ S+YVI
Sbjct: 101 YVHKNCINSFVVGA--STRSALA-----------RKFKAPD-VPTSIIKTAPEFCSVYVI 146

Query: 181 SKGKIVKTRPAISPLENLVAQPKQ--PLGLAYCGS-------QNGARTQTFXXXXXXXXX 333
           SK KI+  R A+ P+ N    P+Q  PLG+   G        +NGA+             
Sbjct: 147 SKAKIISARAALRPVANTAMPPRQPSPLGVQPNGQSDSSSEPENGAK--MLAERNGGGKQ 204

Query: 334 XXXXLYETPRCSSASQSMDNIDLSYRRQRSHNSR 435
                 E P+ S  + S++NI++  R  RS  SR
Sbjct: 205 AKALTRERPKTSPTNISLENIEVPNRGSRSSFSR 238


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