BLASTX nr result

ID: Glycyrrhiza23_contig00030673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030673
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535030.1| PREDICTED: phytochrome E-like [Glycine max]       170   1e-40
ref|XP_003546574.1| PREDICTED: phytochrome E-like [Glycine max]       163   2e-38
ref|XP_003595571.1| Phytochrome E [Medicago truncatula] gi|87241...   162   3e-38
gb|AAF25812.1|AF178571_1 phytochrome E [Solanum lycopersicum]         151   6e-35
ref|XP_002519749.1| phytochrome B, putative [Ricinus communis] g...   141   5e-32

>ref|XP_003535030.1| PREDICTED: phytochrome E-like [Glycine max]
          Length = 1120

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/109 (77%), Positives = 98/109 (89%)
 Frame = -1

Query: 328 DSSLTASVESKMNNNTNNKALAQYGADAEILAEFEQSGVSGKSFDYSKTVLDPPRLVSEE 149
           D+SL+ S ES MN+   +K LAQY ADAEILAEFEQSGVSGKSFDYS+ VLDPPRLVSE+
Sbjct: 11  DTSLSTSAESNMNSK-RDKILAQYSADAEILAEFEQSGVSGKSFDYSRMVLDPPRLVSEQ 69

Query: 148 KMTSYLSKIQRGGLIQPFGCVVVIEEPTFRIIGYSENCFQLLGLKREIE 2
           KMT+YLSKIQRGGLIQPFGC++ IEE TFRIIG+S+NCFQLLGL+R+I+
Sbjct: 70  KMTAYLSKIQRGGLIQPFGCMLAIEESTFRIIGFSDNCFQLLGLERQID 118


>ref|XP_003546574.1| PREDICTED: phytochrome E-like [Glycine max]
          Length = 1121

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/109 (75%), Positives = 94/109 (86%)
 Frame = -1

Query: 328 DSSLTASVESKMNNNTNNKALAQYGADAEILAEFEQSGVSGKSFDYSKTVLDPPRLVSEE 149
           D+SL+ S ES  N    +K LAQY ADAEILAEFE SGVSGKSFDYS+ VLDP RLVSE+
Sbjct: 11  DTSLSTSAESNTNTK-RDKILAQYSADAEILAEFELSGVSGKSFDYSRMVLDPSRLVSEQ 69

Query: 148 KMTSYLSKIQRGGLIQPFGCVVVIEEPTFRIIGYSENCFQLLGLKREIE 2
           KMT+YLSKIQRGGLIQPFGC++ IEE TFRIIGYS+NCFQLLGL+R+I+
Sbjct: 70  KMTAYLSKIQRGGLIQPFGCMLAIEESTFRIIGYSDNCFQLLGLERQID 118


>ref|XP_003595571.1| Phytochrome E [Medicago truncatula] gi|87241383|gb|ABD33241.1|
           Bacteriophytochrome [Medicago truncatula]
           gi|355484619|gb|AES65822.1| Phytochrome E [Medicago
           truncatula]
          Length = 1122

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/102 (79%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
 Frame = -1

Query: 322 SLTASVESKMNNNTNN-KALAQYGADAEILAEFEQSGVSGKSFDYSKTVLDPPRLVSEEK 146
           SL++S ESKMN N    K LAQYG DAE+LAEFEQS V GKSF+YSKT+LDPPRLVSEEK
Sbjct: 13  SLSSSAESKMNTNKETEKTLAQYGVDAELLAEFEQSRVYGKSFEYSKTILDPPRLVSEEK 72

Query: 145 MTSYLSKIQRGGLIQPFGCVVVIEEPTFRIIGYSENCFQLLG 20
           M +YLS+IQRGG IQPFGC+VVIEE TFRIIGYSENCFQLLG
Sbjct: 73  MITYLSRIQRGGFIQPFGCLVVIEESTFRIIGYSENCFQLLG 114


>gb|AAF25812.1|AF178571_1 phytochrome E [Solanum lycopersicum]
          Length = 1137

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/106 (68%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
 Frame = -1

Query: 328 DSSL-TASVESKMNNNTNNKALAQYGADAEILAEFEQSGVSGKSFDYSKTVLDPPRLVSE 152
           DS L T+S  S M NN +  ALAQY ADA+++AEFEQS VSGKSFDYSK+VL PP   +E
Sbjct: 28  DSGLNTSSAASNMKNNASKAALAQYNADAKLMAEFEQSSVSGKSFDYSKSVLFPPHEANE 87

Query: 151 EKMTSYLSKIQRGGLIQPFGCVVVIEEPTFRIIGYSENCFQLLGLK 14
           E++TSYLS+IQRGGL+QPFGC+V IEEPTF+IIGYSENC+ +LG K
Sbjct: 88  EEITSYLSRIQRGGLVQPFGCMVAIEEPTFKIIGYSENCYDMLGFK 133


>ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
           gi|223541166|gb|EEF42722.1| phytochrome B, putative
           [Ricinus communis]
          Length = 1131

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/103 (66%), Positives = 83/103 (80%)
 Frame = -1

Query: 325 SSLTASVESKMNNNTNNKALAQYGADAEILAEFEQSGVSGKSFDYSKTVLDPPRLVSEEK 146
           SS  +S++    N+ N   +AQY ADA +LAEFEQSGVSGKSF+YS++VL  P  V EE+
Sbjct: 16  SSAASSMKPFATNSENTATIAQYNADAGLLAEFEQSGVSGKSFNYSRSVLSAPHNVPEEQ 75

Query: 145 MTSYLSKIQRGGLIQPFGCVVVIEEPTFRIIGYSENCFQLLGL 17
           +T+YLS+IQRGGLIQPFGC+V IEEPTFRII YSENCF LLGL
Sbjct: 76  ITAYLSRIQRGGLIQPFGCMVAIEEPTFRIISYSENCFHLLGL 118


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