BLASTX nr result

ID: Glycyrrhiza23_contig00030660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030660
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530114.1| PREDICTED: GATA transcription factor 9-like ...   246   2e-63
ref|XP_003531654.1| PREDICTED: LOW QUALITY PROTEIN: GATA transcr...   241   4e-62
ref|XP_003627002.1| GATA transcription factor [Medicago truncatu...   241   4e-62
ref|XP_004141657.1| PREDICTED: GATA transcription factor 9-like ...   153   2e-35
ref|XP_004172012.1| PREDICTED: GATA transcription factor 9-like ...   134   8e-30

>ref|XP_003530114.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 347

 Score =  246 bits (627), Expect = 2e-63
 Identities = 130/171 (76%), Positives = 137/171 (80%), Gaps = 7/171 (4%)
 Frame = +3

Query: 3   DLLDFSNADAIMSDGFFDNVAGNXXXXXXXXXXXXCNSSTSGGDNNNRFAAAIVPRGFAS 182
           DLLDFS+ADAIMSDGFFDNVAGN            CNSS SG DN  RFA  IVPRGF S
Sbjct: 40  DLLDFSHADAIMSDGFFDNVAGNSTDSSTVTAVDSCNSSISGSDN--RFATTIVPRGFPS 97

Query: 183 DLQLTGELCVPYDDMAELEWLSNFGEDSFSAEEELKTLQLLSGGGG---AVGAKPQTPES 353
           D Q +GELCVPYD+MAELEWLSNF EDSFSAEEELKTLQLLSG      A+GAKPQTPES
Sbjct: 98  DPQFSGELCVPYDEMAELEWLSNFVEDSFSAEEELKTLQLLSGAAAASTAIGAKPQTPES 157

Query: 354 SSSTDTLPPFAAAESARNAPF----TPLPGKARSKRSRAAPGDWSTRLLHL 494
           SSSTDTLPPFA+ ++ RNAPF    TPLPGKARSKRSRAAPGDWSTRLLHL
Sbjct: 158 SSSTDTLPPFASDDTLRNAPFLHSETPLPGKARSKRSRAAPGDWSTRLLHL 208


>ref|XP_003531654.1| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 9-like
           [Glycine max]
          Length = 347

 Score =  241 bits (615), Expect = 4e-62
 Identities = 128/171 (74%), Positives = 136/171 (79%), Gaps = 7/171 (4%)
 Frame = +3

Query: 3   DLLDFSNADAIMSDGFFDNVAGNXXXXXXXXXXXXCNSSTSGGDNNNRFAAAIVPRGFAS 182
           DLLDFS+ADAIMSDGFFDNV GN            CNSS SG DN+  FA AIVPR + S
Sbjct: 40  DLLDFSHADAIMSDGFFDNVTGNSTDSSTVTAVDSCNSSISGSDNH--FATAIVPRCYHS 97

Query: 183 DLQLTGELCVPYDDMAELEWLSNFGEDSFSAEEELKTLQLLSGGGG---AVGAKPQTPES 353
           D Q +GELCVPYD+MAELEWLSNF EDSFSAEEELKTLQLLSGGG    A+GAKPQTPES
Sbjct: 98  DPQFSGELCVPYDEMAELEWLSNFVEDSFSAEEELKTLQLLSGGGAASTAIGAKPQTPES 157

Query: 354 SSSTDTLPPFAAAESARNAPF----TPLPGKARSKRSRAAPGDWSTRLLHL 494
           SSSTDTLPPFA+  + RNAPF    TP PGKARSKRSRAAPGDWSTRLLHL
Sbjct: 158 SSSTDTLPPFASRRTLRNAPFLHSETPRPGKARSKRSRAAPGDWSTRLLHL 208


>ref|XP_003627002.1| GATA transcription factor [Medicago truncatula]
           gi|355521024|gb|AET01478.1| GATA transcription factor
           [Medicago truncatula]
          Length = 342

 Score =  241 bits (615), Expect = 4e-62
 Identities = 130/172 (75%), Positives = 135/172 (78%), Gaps = 5/172 (2%)
 Frame = +3

Query: 3   DLLDFSNADAIMSDGFFDN-VAGNXXXXXXXXXXXXCNSSTSGGDNNNRFAAAIVPRGFA 179
           DLLDFSNAD IMSDGFFDN VAGN            CNSS SGGDN  RF   IVP GF+
Sbjct: 39  DLLDFSNADVIMSDGFFDNNVAGNSTDSSNVTAVDSCNSSGSGGDN--RFGGTIVPYGFS 96

Query: 180 SDLQLTGELCVPYDDMAELEWLSNFGEDSFSAEEELKTLQLLSGGGGAVGAKPQTPESSS 359
            D+QLTGELCVPYDDMAELEWLSNF EDS+SAEEELKTLQLLSG G     KPQTPESSS
Sbjct: 97  GDVQLTGELCVPYDDMAELEWLSNFVEDSYSAEEELKTLQLLSGAG---AVKPQTPESSS 153

Query: 360 STDTLPPFAAAESARNAPF----TPLPGKARSKRSRAAPGDWSTRLLHLPDA 503
           STDTLP F+  E+ARNA F    TPLPGKARSKRSRAAPGDWSTRLLHLPDA
Sbjct: 154 STDTLPSFSTDETARNASFLRPETPLPGKARSKRSRAAPGDWSTRLLHLPDA 205


>ref|XP_004141657.1| PREDICTED: GATA transcription factor 9-like [Cucumis sativus]
           gi|449480647|ref|XP_004155956.1| PREDICTED: GATA
           transcription factor 9-like [Cucumis sativus]
          Length = 333

 Score =  153 bits (386), Expect = 2e-35
 Identities = 90/170 (52%), Positives = 111/170 (65%), Gaps = 6/170 (3%)
 Frame = +3

Query: 3   DLLDFSNADAIMSDGFFDNVAGNXXXXXXXXXXXXCNSSTSGGDNNNRFAAAIVPRGFAS 182
           DLLDFSN D IM+DG FDN+AG+            CNSS SGGD+++ F   I  R F  
Sbjct: 34  DLLDFSNEDTIMTDGLFDNMAGSSTDSSTITAVDSCNSSVSGGDHHH-FHGNIGSRSF-D 91

Query: 183 DLQLTGELCVPYDDMAELEWLSNFGEDSFSAE-EELKTLQLLSGGGGAVGAKPQTPESSS 359
           + Q +G+LCVP DD+AELEWLSNF EDSFS E ++L+ L  LS       +KPQTPE+SS
Sbjct: 92  ESQFSGDLCVPCDDLAELEWLSNFVEDSFSTEGKDLQVLNYLSNSHST--SKPQTPETSS 149

Query: 360 STD-----TLPPFAAAESARNAPFTPLPGKARSKRSRAAPGDWSTRLLHL 494
           S+      ++P  ++  S R    TPLP KARSKRSR AP DW+TRLLHL
Sbjct: 150 SSALPASLSIPSNSSNNSPRFPAETPLPCKARSKRSRTAPCDWTTRLLHL 199


>ref|XP_004172012.1| PREDICTED: GATA transcription factor 9-like [Cucumis sativus]
          Length = 322

 Score =  134 bits (337), Expect = 8e-30
 Identities = 81/164 (49%), Positives = 94/164 (57%), Gaps = 3/164 (1%)
 Frame = +3

Query: 6   LLDFSNADAIMSDGFFDNVAGNXXXXXXXXXXXXCNSSTSGGDNNNRFAAAIVPRGFASD 185
           LLDFSN D  M  GFFDNVAGN            CNSS SGGDN      A    G   +
Sbjct: 37  LLDFSNEDVAMHSGFFDNVAGNCSDSSTLTAIDSCNSSVSGGDNQ---LLAKFESGSFCE 93

Query: 186 LQLTGELCVPYDDMAELEWLSNFGEDSFSAEE---ELKTLQLLSGGGGAVGAKPQTPESS 356
            Q + ELC+P DD+AELEWLSNF E+SFS EE   +   +  LSGG  +  A P+T  SS
Sbjct: 94  AQFSSELCIPCDDLAELEWLSNFVEESFSTEEIDKDFPAIPFLSGGISS-AATPETSSSS 152

Query: 357 SSTDTLPPFAAAESARNAPFTPLPGKARSKRSRAAPGDWSTRLL 488
            +T      A   +  ++    LPGKARSKRSRA P DWSTRLL
Sbjct: 153 GATAFGYGNAKTTTFFHSEALTLPGKARSKRSRATPCDWSTRLL 196


Top