BLASTX nr result

ID: Glycyrrhiza23_contig00030643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030643
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    91   1e-16
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    86   4e-15
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...    85   5e-15
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    83   3e-14
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...    81   1e-13

>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/69 (63%), Positives = 54/69 (78%)
 Frame = -3

Query: 393 LRHLKLSGNVITNVGLVAILDGCPHLESLDLEECFRVDLSVSLGERCHEQIKDLRPPTNY 214
           L HL+L GN +TN GL+AILDGCPHLESLDL +CF V+L+ SLG+RC EQIK+LR P + 
Sbjct: 201 LHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQIKELRLPCDP 260

Query: 213 EDVDPYWAD 187
            D  P+ AD
Sbjct: 261 TDDCPFEAD 269


>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/66 (62%), Positives = 50/66 (75%)
 Frame = -3

Query: 393 LRHLKLSGNVITNVGLVAILDGCPHLESLDLEECFRVDLSVSLGERCHEQIKDLRPPTNY 214
           LRHL+L GN++TNVGL AILDGCPHLE LDL +C  VDL+  L +RC E+IKDL+ PT+ 
Sbjct: 529 LRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRCVERIKDLKRPTDS 588

Query: 213 EDVDPY 196
               PY
Sbjct: 589 TAGHPY 594



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/59 (50%), Positives = 41/59 (69%)
 Frame = -3

Query: 393 LRHLKLSGNVITNVGLVAILDGCPHLESLDLEECFRVDLSVSLGERCHEQIKDLRPPTN 217
           LRHL+L GN +TN GL AILD C HL+ LDL +C+ ++L     ++C E+IK LR P +
Sbjct: 198 LRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNINLVEDFMKQCVERIKYLRCPND 256


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/69 (60%), Positives = 53/69 (76%)
 Frame = -3

Query: 393 LRHLKLSGNVITNVGLVAILDGCPHLESLDLEECFRVDLSVSLGERCHEQIKDLRPPTNY 214
           L HL+L GN +TN GL+AILDGCP LESLDL +CF V+L+ SLG+RC EQIK+LR P + 
Sbjct: 193 LHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCAEQIKELRLPCDP 252

Query: 213 EDVDPYWAD 187
            D  P+ A+
Sbjct: 253 TDDYPFEAE 261


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/66 (60%), Positives = 49/66 (74%)
 Frame = -3

Query: 393 LRHLKLSGNVITNVGLVAILDGCPHLESLDLEECFRVDLSVSLGERCHEQIKDLRPPTNY 214
           LRHL+L GN +TN GLVA+LDGCPHLESLD+  CF V+L  +LG+RC EQIK  R P + 
Sbjct: 212 LRHLQLIGNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVGTLGKRCKEQIKYFRLPHDA 271

Query: 213 EDVDPY 196
            D  P+
Sbjct: 272 TDDYPF 277


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/62 (61%), Positives = 47/62 (75%)
 Frame = -3

Query: 393 LRHLKLSGNVITNVGLVAILDGCPHLESLDLEECFRVDLSVSLGERCHEQIKDLRPPTNY 214
           LRHL+L GN +TN GL AILDGCPHLE LDL +CF ++L   L +RC E+IKDLR P + 
Sbjct: 362 LRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDLRCPNDS 421

Query: 213 ED 208
           +D
Sbjct: 422 DD 423



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/66 (51%), Positives = 43/66 (65%)
 Frame = -3

Query: 393 LRHLKLSGNVITNVGLVAILDGCPHLESLDLEECFRVDLSVSLGERCHEQIKDLRPPTNY 214
           LRHLKL GN +TN+ L AILD C HL  LDL  CF ++L   L +RC E+I+DLR P + 
Sbjct: 32  LRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRCSERIRDLRRPDDS 91

Query: 213 EDVDPY 196
               P+
Sbjct: 92  TADSPF 97


Top