BLASTX nr result

ID: Glycyrrhiza23_contig00030600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030600
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548967.1| PREDICTED: 30S ribosomal protein S1-like [Gl...   128   6e-28
ref|XP_003556168.1| PREDICTED: 30S ribosomal protein S1-like [Gl...   126   2e-27
ref|XP_003535559.1| PREDICTED: uncharacterized protein LOC100820...   126   2e-27
ref|XP_002527086.1| conserved hypothetical protein [Ricinus comm...   115   5e-24
ref|XP_002263508.2| PREDICTED: uncharacterized protein LOC100240...   113   2e-23

>ref|XP_003548967.1| PREDICTED: 30S ribosomal protein S1-like [Glycine max]
          Length = 439

 Score =  128 bits (321), Expect = 6e-28
 Identities = 68/85 (80%), Positives = 76/85 (89%)
 Frame = +1

Query: 1   NITRAEITSVSDILFVDEKVKVLVVKSAFPDKISLSTADLESEPGLFLSNKERVFLEADM 180
           NITRA+ITS+SDIL VDEKVKVLVVKS   DKISLS ADLESEPGLFLSNKERVFLEADM
Sbjct: 336 NITRAQITSISDILSVDEKVKVLVVKSVSHDKISLSIADLESEPGLFLSNKERVFLEADM 395

Query: 181 MAKKYKQKLPPASITQQQPESLSNS 255
           MAKKY++KLPPA I+ Q+P+ L N+
Sbjct: 396 MAKKYREKLPPAFIS-QRPDGLHNN 419


>ref|XP_003556168.1| PREDICTED: 30S ribosomal protein S1-like [Glycine max]
          Length = 366

 Score =  126 bits (317), Expect = 2e-27
 Identities = 67/85 (78%), Positives = 75/85 (88%)
 Frame = +1

Query: 1   NITRAEITSVSDILFVDEKVKVLVVKSAFPDKISLSTADLESEPGLFLSNKERVFLEADM 180
           NI+RAE+TSVS+IL VDE VKVLVVKS FPDKISLS ADLESEPGLFLSNKER+++EADM
Sbjct: 263 NISRAEVTSVSNILSVDENVKVLVVKSMFPDKISLSIADLESEPGLFLSNKERLYMEADM 322

Query: 181 MAKKYKQKLPPASITQQQPESLSNS 255
           MAKKYKQKLPP S+T Q+ E L  S
Sbjct: 323 MAKKYKQKLPP-SVTTQRLEPLPTS 346


>ref|XP_003535559.1| PREDICTED: uncharacterized protein LOC100820145 [Glycine max]
          Length = 513

 Score =  126 bits (317), Expect = 2e-27
 Identities = 67/86 (77%), Positives = 75/86 (87%)
 Frame = +1

Query: 1   NITRAEITSVSDILFVDEKVKVLVVKSAFPDKISLSTADLESEPGLFLSNKERVFLEADM 180
           NI+RAE+TSVS+IL VDE VK LVVKS FPDKISLS ADLESEPGLFLSNKERV++EADM
Sbjct: 410 NISRAEVTSVSNILSVDENVKALVVKSMFPDKISLSIADLESEPGLFLSNKERVYMEADM 469

Query: 181 MAKKYKQKLPPASITQQQPESLSNSS 258
           MAKKYKQKLPP S+T Q+ E L  S+
Sbjct: 470 MAKKYKQKLPP-SVTTQRLEPLPTSA 494


>ref|XP_002527086.1| conserved hypothetical protein [Ricinus communis]
           gi|223533509|gb|EEF35249.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 476

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/85 (68%), Positives = 71/85 (83%)
 Frame = +1

Query: 1   NITRAEITSVSDILFVDEKVKVLVVKSAFPDKISLSTADLESEPGLFLSNKERVFLEADM 180
           NITR+ +T+VSD+L VDE+VKVLVVKS FPDKISLS ADLESEPGLF+SNKE+VF EA+ 
Sbjct: 371 NITRSRVTAVSDLLKVDERVKVLVVKSMFPDKISLSIADLESEPGLFVSNKEKVFAEAEE 430

Query: 181 MAKKYKQKLPPASITQQQPESLSNS 255
           MAKKY+QKLP    T++    LS++
Sbjct: 431 MAKKYRQKLPAVLATRKSATPLSST 455


>ref|XP_002263508.2| PREDICTED: uncharacterized protein LOC100240915 [Vitis vinifera]
          Length = 513

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/77 (72%), Positives = 68/77 (88%)
 Frame = +1

Query: 1   NITRAEITSVSDILFVDEKVKVLVVKSAFPDKISLSTADLESEPGLFLSNKERVFLEADM 180
           NITRA +TSVSD+L VDEKVKV+VVKS FP+KI+LS ADLESEPGLFLSNKE+VF +A+ 
Sbjct: 404 NITRARVTSVSDLLTVDEKVKVMVVKSMFPNKIALSIADLESEPGLFLSNKEKVFSDAEE 463

Query: 181 MAKKYKQKLPPASITQQ 231
           MAKKY+QKLP  + T++
Sbjct: 464 MAKKYRQKLPAVTATRK 480


Top