BLASTX nr result

ID: Glycyrrhiza23_contig00030595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030595
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...    89   4e-16
gb|EEE56566.1| hypothetical protein OsJ_05904 [Oryza sativa Japo...    88   6e-16
ref|XP_002456461.1| hypothetical protein SORBIDRAFT_03g036763 [S...    82   3e-14
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    78   9e-13
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    78   9e-13

>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/143 (34%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
 Frame = -2

Query: 422  LMNTALLAKQA*RMFQDPNALWVKVLKAIYFPDVEFSNAKRKRNESWAWAWASLIHGKEC 243
            + N A+LA+Q  R+  DPN+L  +VLK  YFPD +F +A + R+ S  + W S++ G+E 
Sbjct: 583  IFNQAMLARQGWRILTDPNSLCSRVLKGRYFPDSDFWSAPKPRSAS--FTWRSILFGREL 640

Query: 242  VMESARWLVCKGDSIDIRRDKWL---ASGHMAELLEGSELIMVEEIINPVSKNWDLCKIR 72
            + +  RW V  G +I I +DKW+    +G +       + + V+ ++NP    WD   ++
Sbjct: 641  LKKGVRWAVGDGSTIKITKDKWIPGVQAGMVNTRFPIPDDVTVDWLMNPERNAWDEEIVK 700

Query: 71   ENFSAQTAIRILQTPISWNCGDD 3
              F+   A  +LQ PIS + G+D
Sbjct: 701  AVFNDDIAREVLQVPISRHGGED 723


>gb|EEE56566.1| hypothetical protein OsJ_05904 [Oryza sativa Japonica Group]
          Length = 420

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 3/143 (2%)
 Frame = -2

Query: 422 LMNTALLAKQA*RMFQDPNALWVKVLKAIYFPDVEFSNAKRKRNESWAWAWASLIHGKEC 243
           + N A+L+KQ  R+  DPN+L  +VLK  YFP+  F +A + R+ S  + W S++ GKE 
Sbjct: 8   IFNQAMLSKQGWRLLTDPNSLCTRVLKGRYFPNCSFWDAPQPRSAS--FTWRSILFGKEL 65

Query: 242 VMESARWLVCKGDSIDIRRDKWL---ASGHMAELLEGSELIMVEEIINPVSKNWDLCKIR 72
           + +   W V  G SI I  D W+    +G ++ L+   E   V+ ++    K W+   ++
Sbjct: 66  LKKGVAWRVGDGKSIKILSDNWIPNVQAGLVSPLMHIPEDATVQFLMEEGGKEWNHDLVK 125

Query: 71  ENFSAQTAIRILQTPISWNCGDD 3
             F  +TA  ILQ PIS + GDD
Sbjct: 126 YAFDEETANEILQVPISRHGGDD 148


>ref|XP_002456461.1| hypothetical protein SORBIDRAFT_03g036763 [Sorghum bicolor]
           gi|241928436|gb|EES01581.1| hypothetical protein
           SORBIDRAFT_03g036763 [Sorghum bicolor]
          Length = 218

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 51/140 (36%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
 Frame = -2

Query: 416 NTALLAKQA*RMFQDPNALWVKVLKAIYFPDVEFSNAKRKRNESWAWAWASLIHGKECVM 237
           N A+LAKQ  R+  DP +L  +V +A Y+PD +   A+ K   S  + W S++ G EC  
Sbjct: 45  NLAMLAKQVCRLLCDPESLCARVFRAKYYPDGKLLEARSKSGSS--YTWQSVLAGLECFK 102

Query: 236 ESARWLVCKGDSIDIRRDKWLASGHMAEL--LEGSELI-MVEEIINPVSKNWDLCKIREN 66
               W V  G  I+I  D W+ S H  ++    G+ L+  V E+INP+   WD   IR  
Sbjct: 103 RGYIWRVGDGTQINIWNDNWIPSSHNMKIHTPRGNILVSTVNELINPIDGGWDEQLIRSL 162

Query: 65  FSAQTAIRILQTPISWNCGD 6
           F      RILQ PI +   D
Sbjct: 163 FWPVDVHRILQIPILYGRED 182


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1184

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
 Frame = -2

Query: 416  NTALLAKQA*RMFQDPNALWVKVLKAIYFPDVEFSNAKRKRNESWAWAWASLIHGKECVM 237
            N A+LAKQ  R   DP++L  +V++  Y+PD     A+ K+  S  +AW S++ G EC  
Sbjct: 680  NRAMLAKQIWRFLCDPDSLCARVMRCKYYPDGNILRARPKKGSS--YAWQSILSGSEC-F 736

Query: 236  ESARWLVCKGDSIDIRRDKWLASGHMAELL--EGSELI-MVEEIINPVSKNWDLCKIREN 66
            +   W +  G  ++I  D  + S    ++L   G  +I  VEE+INPVS  WD   I   
Sbjct: 737  KGYIWRIGDGSQVNIWEDSLIPSSSNGKVLTPRGRNIITKVEELINPVSGGWDEDLIDTL 796

Query: 65   FSAQTAIRILQTPIS 21
            F    A RILQ PIS
Sbjct: 797  FWPIDANRILQIPIS 811


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
 Frame = -2

Query: 416  NTALLAKQA*RMFQDPNALWVKVLKAIYFPDVEFSNAKRKRNESWAWAWASLIHGKECVM 237
            N A+LAKQ  R   DP++L  +V++  Y+PD     A+ K+  S  +AW S++ G EC  
Sbjct: 680  NRAMLAKQIWRFLCDPDSLCARVMRCKYYPDGNILRARPKKGSS--YAWQSILSGSEC-F 736

Query: 236  ESARWLVCKGDSIDIRRDKWLASGHMAELL--EGSELI-MVEEIINPVSKNWDLCKIREN 66
            +   W +  G  ++I  D  + S    ++L   G  +I  VEE+INPVS  WD   I   
Sbjct: 737  KGYIWRIGDGSQVNIWEDSLIPSSSNGKVLTPRGRNIITKVEELINPVSGGWDEDLIDTL 796

Query: 65   FSAQTAIRILQTPIS 21
            F    A RILQ PIS
Sbjct: 797  FWPIDANRILQIPIS 811


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