BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030587
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containi...   155   3e-36
gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]   154   7e-36
ref|XP_003594983.1| Pentatricopeptide repeat-containing protein ...   154   7e-36
ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...   135   4e-30

>ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 608

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/93 (83%), Positives = 81/93 (87%)
 Frame = +3

Query: 3   ERDMVLNSFVGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAIS 182
           ER M LNS++GSALISMYAKCGDL SARRIFD M  RDVITWNA ISGYAQNGMADEAIS
Sbjct: 246 ERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAIS 305

Query: 183 LFHHMKEACVNPNKVTLTAVLSACAGIGALDLG 281
           LFH MKE CV  NK+TLTAVLSACA IGALDLG
Sbjct: 306 LFHAMKEDCVTENKITLTAVLSACATIGALDLG 338



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
 Frame = +3

Query: 27  FVGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAISLFHHMKE- 203
           FV +ALI MYAKCG L SA+R+F  MP ++  +WNA IS  A +G A EA+SLF  M + 
Sbjct: 355 FVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDE 414

Query: 204 -ACVNPNKVTLTAVLSACAGIGALDLG 281
                PN +T   +LSAC   G ++ G
Sbjct: 415 GGGARPNDITFVGLLSACVHAGLVNEG 441



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/82 (42%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = +3

Query: 39  ALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAISLFHHM-KEACVN 215
           +LI+MY++CG +  AR++FD +P RD+++WN+ I+GYA+ G A EA+ +F  M +     
Sbjct: 156 SLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFE 215

Query: 216 PNKVTLTAVLSACAGIGALDLG 281
           P++++L +VL AC  +G L+LG
Sbjct: 216 PDEMSLVSVLGACGELGDLELG 237


>gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 609

 Score =  154 bits (389), Expect = 7e-36
 Identities = 76/93 (81%), Positives = 84/93 (90%)
 Frame = +3

Query: 3   ERDMVLNSFVGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAIS 182
           ER M +NS++GSALISMY+KCG+LVS+RRIFD MP+RD ITWNAAIS YAQNGMADEAIS
Sbjct: 247 ERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAIS 306

Query: 183 LFHHMKEACVNPNKVTLTAVLSACAGIGALDLG 281
           LFH MKE  V+PNKVTLTAVLSACA IGALDLG
Sbjct: 307 LFHSMKENGVDPNKVTLTAVLSACASIGALDLG 339



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = +3

Query: 27  FVGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAISLFHHMKE- 203
           FV +ALI MYAKCG L SA+R+F+ MP ++  +WNA IS  A +G A EA+SLF  M + 
Sbjct: 356 FVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDE 415

Query: 204 -ACVNPNKVTLTAVLSACAGIGALDLG 281
                PN +T  ++LSAC   G +D G
Sbjct: 416 GGSARPNDITFVSLLSACVHAGLVDEG 442



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/83 (37%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
 Frame = +3

Query: 36  SALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAISLFHHMK-EACV 212
           +++++MY +CG+   AR++FD +  +D+++WN+ +SGYA+ G A EA+ +F  ++ E+  
Sbjct: 156 NSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGF 215

Query: 213 NPNKVTLTAVLSACAGIGALDLG 281
            P++++L +VL AC  +G L+LG
Sbjct: 216 EPDEMSLVSVLGACGELGDLELG 238


>ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484031|gb|AES65234.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  154 bits (389), Expect = 7e-36
 Identities = 76/93 (81%), Positives = 84/93 (90%)
 Frame = +3

Query: 3   ERDMVLNSFVGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAIS 182
           ER M +NS++GSALISMY+KCG+LVS+RRIFD MP+RD ITWNAAIS YAQNGMADEAIS
Sbjct: 247 ERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAIS 306

Query: 183 LFHHMKEACVNPNKVTLTAVLSACAGIGALDLG 281
           LFH MKE  V+PNKVTLTAVLSACA IGALDLG
Sbjct: 307 LFHSMKENGVDPNKVTLTAVLSACASIGALDLG 339



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = +3

Query: 27  FVGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAISLFHHMKE- 203
           FV +ALI MYAKCG L SA+R+F+ MP ++  +WNA IS  A +G A EA+SLF  M + 
Sbjct: 356 FVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDE 415

Query: 204 -ACVNPNKVTLTAVLSACAGIGALDLG 281
                PN +T  ++LSAC   G +D G
Sbjct: 416 GGSARPNDITFVSLLSACVHAGLVDEG 442



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/83 (37%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
 Frame = +3

Query: 36  SALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAISLFHHMK-EACV 212
           +++++MY +CG+   AR++FD +  +D+++WN+ +SGYA+ G A EA+ +F  ++ E+  
Sbjct: 156 NSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGF 215

Query: 213 NPNKVTLTAVLSACAGIGALDLG 281
            P++++L +VL AC  +G L+LG
Sbjct: 216 EPDEMSLVSVLGACGELGDLELG 238


>ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/93 (81%), Positives = 80/93 (86%)
 Frame = +3

Query: 3   ERDMVLNSFVGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAIS 182
           ER M LNS++GSALISMYAKCG+L SARRIFD M  RDVITWNA ISGYAQNGMADEAI 
Sbjct: 252 ERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAIL 311

Query: 183 LFHHMKEACVNPNKVTLTAVLSACAGIGALDLG 281
           LFH MKE CV  NK+TLTAVLSACA IGALDLG
Sbjct: 312 LFHGMKEDCVTANKITLTAVLSACATIGALDLG 344



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
 Frame = +3

Query: 27  FVGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAISLFHHMKE- 203
           FV +ALI MYAK G L +A+R+F  MP ++  +WNA IS  A +G A EA+SLF HM + 
Sbjct: 361 FVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDE 420

Query: 204 -ACVNPNKVTLTAVLSACAGIGALDLG 281
                PN +T   +LSAC   G +D G
Sbjct: 421 GGGARPNDITFVGLLSACVHAGLVDEG 447



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/82 (42%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = +3

Query: 39  ALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAISLFHHM-KEACVN 215
           +LI+ YA+CG + SAR++FD +P+RD ++WN+ I+GYA+ G A EA+ +F  M +     
Sbjct: 162 SLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFE 221

Query: 216 PNKVTLTAVLSACAGIGALDLG 281
           P++++L ++L AC  +G L+LG
Sbjct: 222 PDEMSLVSLLGACGELGDLELG 243


>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
           protein product [Vitis vinifera]
          Length = 618

 Score =  135 bits (339), Expect = 4e-30
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = +3

Query: 3   ERDMVLNSFVGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAIS 182
           E +M LNSFVGSALI MY KCGDL SARR+FD M  +DV+TWNA I+GYAQNG++DEAI 
Sbjct: 255 ENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAII 314

Query: 183 LFHHMKEACVNPNKVTLTAVLSACAGIGALDLG 281
           LF  M+E+ VNP+K+TL  VLSACA IGALD G
Sbjct: 315 LFSGMRESGVNPDKITLVGVLSACASIGALDFG 347



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 37/84 (44%), Positives = 61/84 (72%)
 Frame = +3

Query: 30  VGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAISLFHHMKEAC 209
           V  +LI+MY++CG+L  ARR+FD +  +D+++WN+ ISGY++ G A +A+ LF  M++A 
Sbjct: 163 VRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAG 222

Query: 210 VNPNKVTLTAVLSACAGIGALDLG 281
             P+++TL ++L AC  +G L LG
Sbjct: 223 FEPDEMTLVSILGACGDLGDLGLG 246



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
 Frame = +3

Query: 3   ERDMVLNSFVGSALISMYAKCGDLVSARRIFDSMPNRDVITWNAAISGYAQNGMADEAIS 182
           ER +  + +V +ALI MYAKCG L  A R+F+ MP ++ ++WNA IS  A +G   E++S
Sbjct: 356 ERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLS 415

Query: 183 LFHHMKE--ACVNPNKVTLTAVLSACAGIGALDLG 281
           LF  M +    V PN ++   VLSAC   G +D G
Sbjct: 416 LFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEG 450