BLASTX nr result

ID: Glycyrrhiza23_contig00030530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030530
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591411.1| Hybrid signal transduction histidine kinase ...   199   2e-49
ref|XP_003520750.1| PREDICTED: histidine kinase CKI1-like [Glyci...   164   1e-38
ref|XP_004144811.1| PREDICTED: histidine kinase CKI1-like [Cucum...   142   4e-32
ref|XP_004158748.1| PREDICTED: LOW QUALITY PROTEIN: histidine ki...   140   9e-32
emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]   135   5e-30

>ref|XP_003591411.1| Hybrid signal transduction histidine kinase I [Medicago truncatula]
           gi|355480459|gb|AES61662.1| Hybrid signal transduction
           histidine kinase I [Medicago truncatula]
          Length = 486

 Score =  199 bits (506), Expect = 2e-49
 Identities = 106/176 (60%), Positives = 126/176 (71%), Gaps = 8/176 (4%)
 Frame = -3

Query: 536 DESPCLSA------EQKSSVRKSPV-HIHHGEIQKCGDHSSCCKPLCGKKILVVEDNEML 378
           DES CLS        QKS V+      +H GEI++ G  SS  +PL GKK LVV+D+ ML
Sbjct: 309 DESVCLSVGQCWKGTQKSYVKMGRKGSVHQGEIEESGGESSNPEPLSGKKFLVVDDSPML 368

Query: 377 RKTALATLIPLGAS-IEQCENGEQAVRLVHEGLTKDFPNPPYDYILMDCLMPVMDGCEAT 201
           RK  +ATL  LG + I+QCENGE+AVR V EGLTKDF NPPYDYILMDC MPV DG EAT
Sbjct: 369 RKICMATLRSLGVTTIDQCENGEEAVRTVQEGLTKDFTNPPYDYILMDCQMPVKDGFEAT 428

Query: 200 RRIRVMEKPYGVHIPIIALTADTDRTMTVTGMDFHIEKPLRREHLLEAIRYLHRKD 33
           R IR MEK YG+HI IIAL+A+ D+  T TGMDFHI KP+++EHLL+AI Y+   D
Sbjct: 429 REIREMEKQYGLHISIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAITYIENSD 484


>ref|XP_003520750.1| PREDICTED: histidine kinase CKI1-like [Glycine max]
          Length = 1056

 Score =  164 bits (414), Expect = 1e-38
 Identities = 90/161 (55%), Positives = 117/161 (72%), Gaps = 3/161 (1%)
 Frame = -3

Query: 506  KSSVRKSPVHIHHGEIQKCGDHSSCCKPLCGKKILVVEDNEMLRKTALATLIPLGASIEQ 327
            +S  RKS  HIH GEIQ+C + S+  KPL G K LVVED  +LR+   +TL  LGAS+ +
Sbjct: 899  RSRARKS--HIHQGEIQECEELSNE-KPLWGMKCLVVEDVVLLRRITKSTLDRLGASVME 955

Query: 326  CENGEQAVRLVHEGLTKDFPNPPYDYILMDCLMPVMDGCEATRRIRVMEKPYGVHIPIIA 147
            CENGEQAV+ V EGLT++  N P D+ILMDC MPVMDG EATRRIR +EK +GVHIPI A
Sbjct: 956  CENGEQAVQTVEEGLTRNSSNRPCDFILMDCQMPVMDGYEATRRIREIEKSHGVHIPIFA 1015

Query: 146  LTADTDRTMTVT---GMDFHIEKPLRREHLLEAIRYLHRKD 33
            LTA+T +   ++   GMD H+ KP+ +E LL+AI+ ++ K+
Sbjct: 1016 LTANTGKEAILSIEAGMDDHLIKPINKEALLKAIKRIYTKE 1056


>ref|XP_004144811.1| PREDICTED: histidine kinase CKI1-like [Cucumis sativus]
          Length = 1038

 Score =  142 bits (357), Expect = 4e-32
 Identities = 84/172 (48%), Positives = 107/172 (62%), Gaps = 9/172 (5%)
 Frame = -3

Query: 524  CLSAEQKSSVRKSPVHIHHGEIQKCGDHSSCCKPLCGKKILVVEDNEMLRKTALATLIPL 345
            C+ ++ +SS       +H    ++   HSS  KPL GKK+LV EDN +L+K A   L  L
Sbjct: 867  CIGSKTRSSPIVEQKSLHQEIREEKYKHSSGEKPLSGKKVLVAEDNLVLQKLARLNLERL 926

Query: 344  GASIEQCENGEQAVRLVHEGLTKDFPNP-----PYDYILMDCLMPVMDGCEATRRIRVME 180
            GA+ E CENG++A+ LV  GL     +      PYDYILMDC MP+MDG EATR IR +E
Sbjct: 927  GATTEICENGKEALELVCNGLGNQRKHGASNTLPYDYILMDCEMPIMDGYEATREIRKVE 986

Query: 179  KPYGVHIPIIALTADT---DRTMTV-TGMDFHIEKPLRREHLLEAIRYLHRK 36
            + Y  HIPIIALTA T   +   T+  GMD H+ KPLR+E LLEAI  +H K
Sbjct: 987  RYYNTHIPIIALTAHTTGEEAGKTIEAGMDVHLGKPLRKEKLLEAITCIHSK 1038


>ref|XP_004158748.1| PREDICTED: LOW QUALITY PROTEIN: histidine kinase CKI1-like [Cucumis
            sativus]
          Length = 1001

 Score =  140 bits (354), Expect = 9e-32
 Identities = 83/168 (49%), Positives = 106/168 (63%), Gaps = 9/168 (5%)
 Frame = -3

Query: 524  CLSAEQKSSVRKSPVHIHHGEIQKCGDHSSCCKPLCGKKILVVEDNEMLRKTALATLIPL 345
            C+ ++ +SS       +H    ++   HSS  KPL GKK+LV EDN +L+K A   L  L
Sbjct: 814  CIGSKTRSSPIVEQKSLHQEIREEKYKHSSGEKPLSGKKVLVAEDNLVLQKLARLNLERL 873

Query: 344  GASIEQCENGEQAVRLVHEGLTKDFPNP-----PYDYILMDCLMPVMDGCEATRRIRVME 180
            GA+ E CENG++A+ LV  GL +   +      PYDYILMDC MP+MDG EATR IR +E
Sbjct: 874  GATTEICENGKEALELVCNGLXQSKEHGASNTLPYDYILMDCEMPIMDGYEATREIRKVE 933

Query: 179  KPYGVHIPIIALTADT---DRTMTV-TGMDFHIEKPLRREHLLEAIRY 48
            + Y  HIPIIALTA T   +   T+  GMD H+ KPLR+E LLEAI Y
Sbjct: 934  RYYNTHIPIIALTAHTTGEEAGKTIEAGMDVHLGKPLRKEKLLEAITY 981


>emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]
          Length = 1143

 Score =  135 bits (339), Expect = 5e-30
 Identities = 78/157 (49%), Positives = 101/157 (64%), Gaps = 10/157 (6%)
 Frame = -3

Query: 476  IHHGEIQKCGDHSSCCKPLCGKKILVVEDNEMLRKTALATLIPLGASIEQCENGEQAVRL 297
            +   EIQ+ G  SS   PL GK++L+ ED+ +L K A A +  LG ++E C+NG +AV L
Sbjct: 989  VKESEIQEVGT-SSNQNPLRGKRVLIAEDSMVLCKLATAHVTRLGGTVEACDNGAKAVEL 1047

Query: 296  VHEGLTKDFPNP-----PYDYILMDCLMPVMDGCEATRRIRVMEKPYGVHIPIIALTA-- 138
            V  GL  +  N      PYDYILMDC MP MDG EAT+RIR  E+ YGVHIPIIALTA  
Sbjct: 1048 VCNGLRNNXKNNASIILPYDYILMDCEMPEMDGYEATKRIREEEQQYGVHIPIIALTAHA 1107

Query: 137  ---DTDRTMTVTGMDFHIEKPLRREHLLEAIRYLHRK 36
               +  RT+   GMD+H+ KPL+RE L+ AI Y + +
Sbjct: 1108 NGEEAKRTIE-AGMDYHLSKPLKRETLMGAIEYXNXR 1143


Top