BLASTX nr result

ID: Glycyrrhiza23_contig00030509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030509
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520660.1| PREDICTED: probable pectate lyase 12-like [G...   240   1e-61
ref|XP_003541430.1| PREDICTED: probable pectate lyase 12-like [G...   225   3e-57
ref|XP_004143279.1| PREDICTED: probable pectate lyase 12-like [C...   202   2e-50
ref|XP_002519460.1| Pectate lyase precursor, putative [Ricinus c...   198   3e-49
gb|ADU02588.1| pectate lyase-like protein 3 [Vitis vinifera]          189   3e-46

>ref|XP_003520660.1| PREDICTED: probable pectate lyase 12-like [Glycine max]
          Length = 470

 Score =  240 bits (612), Expect = 1e-61
 Identities = 118/144 (81%), Positives = 121/144 (84%), Gaps = 1/144 (0%)
 Frame = +2

Query: 86  MFQTICIVLISVL-SSFSPRGTAMLNLTLPGTHPDPEAVAHEVHRKVNASIGRREMLAVS 262
           + QT CI L+SVL SSFSP GTAMLNLTLPG HPDPEAVAHEVHRKVNASI RREML+VS
Sbjct: 2   LLQTTCIFLLSVLLSSFSPLGTAMLNLTLPGAHPDPEAVAHEVHRKVNASIARREMLSVS 61

Query: 263 EKDGSSSCFTGNPIDDCWKCDPDWPNNRQRLADCAIXXXXXXXXXXXXEFYVVTDSSDDD 442
           EKDGSS C TGNPIDDCWKCDPDWPNNRQRLADC I            EFYVVTDSSDDD
Sbjct: 62  EKDGSS-CLTGNPIDDCWKCDPDWPNNRQRLADCVIGFGQYAKGGKGGEFYVVTDSSDDD 120

Query: 443 AVNPKPGTLRYAVIQNEPLWIVFP 514
            VNPKPGTLRYAVIQNEPLWIVFP
Sbjct: 121 PVNPKPGTLRYAVIQNEPLWIVFP 144


>ref|XP_003541430.1| PREDICTED: probable pectate lyase 12-like [Glycine max]
          Length = 477

 Score =  225 bits (573), Expect = 3e-57
 Identities = 107/143 (74%), Positives = 116/143 (81%)
 Frame = +2

Query: 86  MFQTICIVLISVLSSFSPRGTAMLNLTLPGTHPDPEAVAHEVHRKVNASIGRREMLAVSE 265
           M QT CI+L SV++ F P GTAMLNLTLPG HPDPEAVA EVHRKVNAS+ RREML VSE
Sbjct: 1   MLQTTCIILFSVVAIFLPHGTAMLNLTLPGQHPDPEAVAREVHRKVNASMARREMLGVSE 60

Query: 266 KDGSSSCFTGNPIDDCWKCDPDWPNNRQRLADCAIXXXXXXXXXXXXEFYVVTDSSDDDA 445
           K+  +SC TGNPIDDCWKCDPDW NNRQRLADCAI            +FY+VTDSSD+D 
Sbjct: 61  KE-VASCLTGNPIDDCWKCDPDWANNRQRLADCAIGFGQNAKGGKGGQFYIVTDSSDEDP 119

Query: 446 VNPKPGTLRYAVIQNEPLWIVFP 514
           VNPKPGTLRYAVIQNEPLWIVFP
Sbjct: 120 VNPKPGTLRYAVIQNEPLWIVFP 142


>ref|XP_004143279.1| PREDICTED: probable pectate lyase 12-like [Cucumis sativus]
          Length = 480

 Score =  202 bits (514), Expect = 2e-50
 Identities = 100/149 (67%), Positives = 112/149 (75%), Gaps = 6/149 (4%)
 Frame = +2

Query: 86  MFQTICIVLISVL--SSFSPRG----TAMLNLTLPGTHPDPEAVAHEVHRKVNASIGRRE 247
           M  T CIVL+++L  S    R     +A LNLTLPG HP PE VA EVHRKVNAS+ RR+
Sbjct: 1   MLATTCIVLLALLLPSRLPLRAAATTSAALNLTLPGQHPSPELVAQEVHRKVNASLTRRQ 60

Query: 248 MLAVSEKDGSSSCFTGNPIDDCWKCDPDWPNNRQRLADCAIXXXXXXXXXXXXEFYVVTD 427
           +L +SEKD SSSC+TGNPIDDCWKCD +WPNNRQRLADCAI            EFY+VTD
Sbjct: 61  LLQISEKDESSSCYTGNPIDDCWKCDRNWPNNRQRLADCAIGFGQYALGGKNGEFYIVTD 120

Query: 428 SSDDDAVNPKPGTLRYAVIQNEPLWIVFP 514
            SDDDAVNPKPGTLRYAVIQ +PLWIVFP
Sbjct: 121 DSDDDAVNPKPGTLRYAVIQPQPLWIVFP 149


>ref|XP_002519460.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223541323|gb|EEF42874.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 483

 Score =  198 bits (504), Expect = 3e-49
 Identities = 95/137 (69%), Positives = 107/137 (78%)
 Frame = +2

Query: 104 IVLISVLSSFSPRGTAMLNLTLPGTHPDPEAVAHEVHRKVNASIGRREMLAVSEKDGSSS 283
           IVLI +LSSFS  G AM NLT P  HP+PE V  +V R+VNAS+ RR+ML +S+KD  ++
Sbjct: 7   IVLILLLSSFSSFGLAMWNLTFPTPHPNPEQVVQDVQRRVNASMSRRQMLQISQKD-QTT 65

Query: 284 CFTGNPIDDCWKCDPDWPNNRQRLADCAIXXXXXXXXXXXXEFYVVTDSSDDDAVNPKPG 463
           C TGNPIDDCWKCDPDWPNNRQRLADCAI            E+Y+VTDSSDDDAVNPKPG
Sbjct: 66  CQTGNPIDDCWKCDPDWPNNRQRLADCAIGFGQYAMGGKNGEYYIVTDSSDDDAVNPKPG 125

Query: 464 TLRYAVIQNEPLWIVFP 514
           TLRYAVIQ EPLWIVFP
Sbjct: 126 TLRYAVIQEEPLWIVFP 142


>gb|ADU02588.1| pectate lyase-like protein 3 [Vitis vinifera]
          Length = 489

 Score =  189 bits (479), Expect = 3e-46
 Identities = 91/142 (64%), Positives = 104/142 (73%)
 Frame = +2

Query: 86  MFQTICIVLISVLSSFSPRGTAMLNLTLPGTHPDPEAVAHEVHRKVNASIGRREMLAVSE 265
           M +  CIVLIS+LSS S   T M NLTL G HPDPEAV  EV R+VN S+ RR+ L VS+
Sbjct: 21  MLRRTCIVLISLLSSLSALATPMQNLTLLGQHPDPEAVVQEVQRRVNVSVSRRQTLEVSQ 80

Query: 266 KDGSSSCFTGNPIDDCWKCDPDWPNNRQRLADCAIXXXXXXXXXXXXEFYVVTDSSDDDA 445
            D SSSC TGNPIDDCW+CDP+W  +RQRLADCAI            + YVVTDSSD DA
Sbjct: 81  SDQSSSCVTGNPIDDCWRCDPNWEADRQRLADCAIGFGQYALGGKGGQIYVVTDSSDHDA 140

Query: 446 VNPKPGTLRYAVIQNEPLWIVF 511
           V P+PGTLRYAVIQ++PLWIVF
Sbjct: 141 VTPRPGTLRYAVIQSDPLWIVF 162


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