BLASTX nr result
ID: Glycyrrhiza23_contig00030452
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00030452 (419 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003609674.1| Translocase of chloroplast [Medicago truncat... 121 7e-26 ref|XP_002531885.1| protein translocase, putative [Ricinus commu... 95 7e-18 ref|XP_002267274.1| PREDICTED: translocase of chloroplast 159, c... 91 7e-17 ref|XP_002335079.1| predicted protein [Populus trichocarpa] gi|2... 91 1e-16 ref|XP_002332265.1| predicted protein [Populus trichocarpa] gi|2... 91 1e-16 >ref|XP_003609674.1| Translocase of chloroplast [Medicago truncatula] gi|355510729|gb|AES91871.1| Translocase of chloroplast [Medicago truncatula] Length = 928 Score = 121 bits (303), Expect = 7e-26 Identities = 56/71 (78%), Positives = 59/71 (83%) Frame = -2 Query: 418 HPACGKNISGDCELPNGLRWRSQLLALCFSLKILSQVSSVSGPQTPFDHWRHLFFQDHSP 239 HP CGKNISGD LPNGLRWRSQLLALCFSLKILSQVSSVS P T FDHW+ QDHS Sbjct: 805 HPLCGKNISGDSVLPNGLRWRSQLLALCFSLKILSQVSSVSIPCTLFDHWKQFLLQDHSE 864 Query: 238 PLCHLFSCLLK 206 P+CHL SCLL+ Sbjct: 865 PMCHLCSCLLR 875 >ref|XP_002531885.1| protein translocase, putative [Ricinus communis] gi|223528493|gb|EEF30522.1| protein translocase, putative [Ricinus communis] Length = 1051 Score = 94.7 bits (234), Expect = 7e-18 Identities = 55/121 (45%), Positives = 70/121 (57%), Gaps = 16/121 (13%) Frame = -2 Query: 418 HPACGKNISGDCELPNGLRWRSQLLALCFSLKILSQVSSVSGPQTPFDHWRHLFFQDHSP 239 H +C KN G LPNG WR QLL LC+S+KILS+ SS+S PQ PFDH + F+ SP Sbjct: 589 HSSCRKNRDGQKVLPNGQTWRPQLLMLCYSMKILSEASSLSKPQDPFDHRKLFGFRSRSP 648 Query: 238 PLCHLFSCLLKSPAHLKFSANWN*LGCSN----------------EYENEHDQLLPF*PV 107 PL +L S LL+S +H K S++ G N E E+E+DQL PF P+ Sbjct: 649 PLPYLLSWLLQSRSHPKLSSD---QGVDNVDSDVDLADLSDSDDEEEEDEYDQLPPFKPL 705 Query: 106 R 104 R Sbjct: 706 R 706 >ref|XP_002267274.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like [Vitis vinifera] Length = 1465 Score = 91.3 bits (225), Expect = 7e-17 Identities = 54/118 (45%), Positives = 68/118 (57%), Gaps = 13/118 (11%) Frame = -2 Query: 418 HPACGKNISGDCELPNGLRWRSQLLALCFSLKILSQVSSVSGPQTPFDHWRHLFFQDHSP 239 HP+C KN G LPNG WR QLL L +S+KILS+ SS+S PQ PFDH + F+ +P Sbjct: 1002 HPSCRKNRDGQKVLPNGQSWRPQLLLLSYSMKILSEASSLSKPQDPFDHRKLFGFRVRAP 1061 Query: 238 PLCHLFSCLLKSPAHLKFSANW------------N*LGCSNEY-ENEHDQLLPF*PVR 104 PL +L S LL+S H K SA + C E E+E+DQL PF P+R Sbjct: 1062 PLPYLLSWLLQSRTHPKLSAEQGGDNGDSDIDLDDLSDCEQEEDEDEYDQLPPFKPLR 1119 >ref|XP_002335079.1| predicted protein [Populus trichocarpa] gi|222832783|gb|EEE71260.1| predicted protein [Populus trichocarpa] Length = 321 Score = 90.5 bits (223), Expect = 1e-16 Identities = 51/117 (43%), Positives = 68/117 (58%), Gaps = 12/117 (10%) Frame = -2 Query: 418 HPACGKNISGDCELPNGLRWRSQLLALCFSLKILSQVSSVSGPQTPFDHWRHLFFQDHSP 239 HP C KN + + LPNG WR QLL LC+SLKILS+ SS++ P+ PFDH + F+ S Sbjct: 78 HPLCQKNENSEYILPNGQSWRPQLLLLCYSLKILSEASSIAKPRDPFDHKKPFGFRLRSL 137 Query: 238 PLCHLFSCLLKSPAHLKFSAN------------WN*LGCSNEYENEHDQLLPF*PVR 104 PL HL S LL+S H K +A+ + E E+E+DQL PF P++ Sbjct: 138 PLPHLVSSLLQSRPHPKLTADQGGDDIDSDIDMLDLSDSDEEIEDEYDQLPPFKPLK 194 >ref|XP_002332265.1| predicted protein [Populus trichocarpa] gi|222832030|gb|EEE70507.1| predicted protein [Populus trichocarpa] Length = 861 Score = 90.5 bits (223), Expect = 1e-16 Identities = 51/117 (43%), Positives = 68/117 (58%), Gaps = 12/117 (10%) Frame = -2 Query: 418 HPACGKNISGDCELPNGLRWRSQLLALCFSLKILSQVSSVSGPQTPFDHWRHLFFQDHSP 239 HP C KN + + LPNG WR QLL LC+SLKILS+ SS++ P+ PFDH + F+ S Sbjct: 400 HPLCQKNENSEYILPNGQSWRPQLLLLCYSLKILSEASSIAKPRDPFDHKKPFGFRLRSL 459 Query: 238 PLCHLFSCLLKSPAHLKFSANW------------N*LGCSNEYENEHDQLLPF*PVR 104 PL HL S LL+S H K +A+ + E E+E+DQL PF P++ Sbjct: 460 PLPHLVSSLLQSRPHPKLTADQGGDDIDSDIDMVDLSDSDEEIEDEYDQLPPFKPLK 516