BLASTX nr result

ID: Glycyrrhiza23_contig00030452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030452
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609674.1| Translocase of chloroplast [Medicago truncat...   121   7e-26
ref|XP_002531885.1| protein translocase, putative [Ricinus commu...    95   7e-18
ref|XP_002267274.1| PREDICTED: translocase of chloroplast 159, c...    91   7e-17
ref|XP_002335079.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002332265.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>ref|XP_003609674.1| Translocase of chloroplast [Medicago truncatula]
            gi|355510729|gb|AES91871.1| Translocase of chloroplast
            [Medicago truncatula]
          Length = 928

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/71 (78%), Positives = 59/71 (83%)
 Frame = -2

Query: 418  HPACGKNISGDCELPNGLRWRSQLLALCFSLKILSQVSSVSGPQTPFDHWRHLFFQDHSP 239
            HP CGKNISGD  LPNGLRWRSQLLALCFSLKILSQVSSVS P T FDHW+    QDHS 
Sbjct: 805  HPLCGKNISGDSVLPNGLRWRSQLLALCFSLKILSQVSSVSIPCTLFDHWKQFLLQDHSE 864

Query: 238  PLCHLFSCLLK 206
            P+CHL SCLL+
Sbjct: 865  PMCHLCSCLLR 875


>ref|XP_002531885.1| protein translocase, putative [Ricinus communis]
           gi|223528493|gb|EEF30522.1| protein translocase,
           putative [Ricinus communis]
          Length = 1051

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 55/121 (45%), Positives = 70/121 (57%), Gaps = 16/121 (13%)
 Frame = -2

Query: 418 HPACGKNISGDCELPNGLRWRSQLLALCFSLKILSQVSSVSGPQTPFDHWRHLFFQDHSP 239
           H +C KN  G   LPNG  WR QLL LC+S+KILS+ SS+S PQ PFDH +   F+  SP
Sbjct: 589 HSSCRKNRDGQKVLPNGQTWRPQLLMLCYSMKILSEASSLSKPQDPFDHRKLFGFRSRSP 648

Query: 238 PLCHLFSCLLKSPAHLKFSANWN*LGCSN----------------EYENEHDQLLPF*PV 107
           PL +L S LL+S +H K S++    G  N                E E+E+DQL PF P+
Sbjct: 649 PLPYLLSWLLQSRSHPKLSSD---QGVDNVDSDVDLADLSDSDDEEEEDEYDQLPPFKPL 705

Query: 106 R 104
           R
Sbjct: 706 R 706


>ref|XP_002267274.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like [Vitis
            vinifera]
          Length = 1465

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 54/118 (45%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
 Frame = -2

Query: 418  HPACGKNISGDCELPNGLRWRSQLLALCFSLKILSQVSSVSGPQTPFDHWRHLFFQDHSP 239
            HP+C KN  G   LPNG  WR QLL L +S+KILS+ SS+S PQ PFDH +   F+  +P
Sbjct: 1002 HPSCRKNRDGQKVLPNGQSWRPQLLLLSYSMKILSEASSLSKPQDPFDHRKLFGFRVRAP 1061

Query: 238  PLCHLFSCLLKSPAHLKFSANW------------N*LGCSNEY-ENEHDQLLPF*PVR 104
            PL +L S LL+S  H K SA              +   C  E  E+E+DQL PF P+R
Sbjct: 1062 PLPYLLSWLLQSRTHPKLSAEQGGDNGDSDIDLDDLSDCEQEEDEDEYDQLPPFKPLR 1119


>ref|XP_002335079.1| predicted protein [Populus trichocarpa] gi|222832783|gb|EEE71260.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/117 (43%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
 Frame = -2

Query: 418 HPACGKNISGDCELPNGLRWRSQLLALCFSLKILSQVSSVSGPQTPFDHWRHLFFQDHSP 239
           HP C KN + +  LPNG  WR QLL LC+SLKILS+ SS++ P+ PFDH +   F+  S 
Sbjct: 78  HPLCQKNENSEYILPNGQSWRPQLLLLCYSLKILSEASSIAKPRDPFDHKKPFGFRLRSL 137

Query: 238 PLCHLFSCLLKSPAHLKFSAN------------WN*LGCSNEYENEHDQLLPF*PVR 104
           PL HL S LL+S  H K +A+             +      E E+E+DQL PF P++
Sbjct: 138 PLPHLVSSLLQSRPHPKLTADQGGDDIDSDIDMLDLSDSDEEIEDEYDQLPPFKPLK 194


>ref|XP_002332265.1| predicted protein [Populus trichocarpa] gi|222832030|gb|EEE70507.1|
           predicted protein [Populus trichocarpa]
          Length = 861

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/117 (43%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
 Frame = -2

Query: 418 HPACGKNISGDCELPNGLRWRSQLLALCFSLKILSQVSSVSGPQTPFDHWRHLFFQDHSP 239
           HP C KN + +  LPNG  WR QLL LC+SLKILS+ SS++ P+ PFDH +   F+  S 
Sbjct: 400 HPLCQKNENSEYILPNGQSWRPQLLLLCYSLKILSEASSIAKPRDPFDHKKPFGFRLRSL 459

Query: 238 PLCHLFSCLLKSPAHLKFSANW------------N*LGCSNEYENEHDQLLPF*PVR 104
           PL HL S LL+S  H K +A+             +      E E+E+DQL PF P++
Sbjct: 460 PLPHLVSSLLQSRPHPKLTADQGGDDIDSDIDMVDLSDSDEEIEDEYDQLPPFKPLK 516


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