BLASTX nr result

ID: Glycyrrhiza23_contig00030438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030438
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...   131   5e-29
ref|XP_002313097.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002521858.1| pentatricopeptide repeat-containing protein,...   123   2e-26
ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata] g...   114   8e-24

>ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/99 (69%), Positives = 84/99 (84%)
 Frame = -1

Query: 449 VRKAYSMYMEMVHCGFVPHMVTVIALIKALSREGMDDELSWVMKNVLSSCRLSDAELPKA 270
           V KAY++YME+ H  F  H V VIAL+KAL+REGM+DELS +++N+L SCRL+DA++ K 
Sbjct: 658 VHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKV 717

Query: 269 LVEINLKEGNMDAVLNVLTEMAKDGLLPDGGKYSYAPAS 153
           LVE+N KEGNMDAVLNVLTEMAKDGLLPDGG +S APAS
Sbjct: 718 LVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHSSAPAS 756


>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/94 (68%), Positives = 80/94 (85%)
 Frame = -1

Query: 443 KAYSMYMEMVHCGFVPHMVTVIALIKALSREGMDDELSWVMKNVLSSCRLSDAELPKALV 264
           KA+++Y EM+H GFVPH VTVI LIKAL +EGM++E+S V+ + L SCRL++AEL K LV
Sbjct: 667 KAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLV 726

Query: 263 EINLKEGNMDAVLNVLTEMAKDGLLPDGGKYSYA 162
           EIN KEGNM+AVLNVLT+MAKDGLLP+ GK +YA
Sbjct: 727 EINHKEGNMEAVLNVLTDMAKDGLLPNSGKTAYA 760


>ref|XP_002313097.1| predicted protein [Populus trichocarpa] gi|222849505|gb|EEE87052.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/100 (63%), Positives = 80/100 (80%)
 Frame = -1

Query: 449 VRKAYSMYMEMVHCGFVPHMVTVIALIKALSREGMDDELSWVMKNVLSSCRLSDAELPKA 270
           V KA+ +Y EMV  GF+PH VT+IAL+KAL  EGMD++L+ V++++L SC+LSDAEL KA
Sbjct: 654 VHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKA 713

Query: 269 LVEINLKEGNMDAVLNVLTEMAKDGLLPDGGKYSYAPASA 150
           LV+IN KEGN+DAV N+LTEMAKDG LP G     APA+A
Sbjct: 714 LVQINHKEGNIDAVFNLLTEMAKDGFLPSGA----APANA 749


>ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538896|gb|EEF40494.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  123 bits (308), Expect = 2e-26
 Identities = 61/91 (67%), Positives = 72/91 (79%)
 Frame = -1

Query: 449 VRKAYSMYMEMVHCGFVPHMVTVIALIKALSREGMDDELSWVMKNVLSSCRLSDAELPKA 270
           V KAY +Y EMVH  FVPH VTV+AL+KAL  EGMD EL+ V+ ++L SC+L+DAEL K 
Sbjct: 434 VLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKV 493

Query: 269 LVEINLKEGNMDAVLNVLTEMAKDGLLPDGG 177
           LVEIN KEGNMD V N+LTEMAKDGL+P  G
Sbjct: 494 LVEINQKEGNMDMVFNLLTEMAKDGLIPSTG 524


>ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
           gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 747

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/90 (64%), Positives = 70/90 (77%)
 Frame = -1

Query: 449 VRKAYSMYMEMVHCGFVPHMVTVIALIKALSREGMDDELSWVMKNVLSSCRLSDAELPKA 270
           +RKAYS+Y EMV  GF+ H VTVIAL+K L +EG  +EL+ V+ NVL SC LS+AE  K 
Sbjct: 656 IRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKV 715

Query: 269 LVEINLKEGNMDAVLNVLTEMAKDGLLPDG 180
           LVEIN +EGNMD VL+VL EMAKDG LP+G
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGFLPNG 745