BLASTX nr result

ID: Glycyrrhiza23_contig00030414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030414
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula] ...   292   2e-77
ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   272   2e-71
ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   230   8e-59
ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   228   3e-58
ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula] ...   221   4e-56

>ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 1029

 Score =  292 bits (747), Expect = 2e-77
 Identities = 142/170 (83%), Positives = 154/170 (90%), Gaps = 2/170 (1%)
 Frame = +3

Query: 3    KIEDSLT--EEEQLQNSMMLNLLYVNRAHDLASHILLHYQVYGQSPAHERCVSPINTNAS 176
            K+ED+LT  EEEQ +NS+ML+LLYVNRAHDLASHILL+YQV+G+   HERCVSPIN NAS
Sbjct: 601  KLEDTLTMQEEEQRRNSVMLDLLYVNRAHDLASHILLYYQVFGRLATHERCVSPINANAS 660

Query: 177  GGMNGYLYLCERNVLSSIVSSPIDGLPDIECNQVLNITYLNPCRHGHIPKLPDGVLIPKK 356
            GGMNGYL+ CERNVLSSI  SPIDGLPDIE NQVLNITYLNPCRHGHIPK PDGV+IPKK
Sbjct: 661  GGMNGYLWACERNVLSSIAPSPIDGLPDIESNQVLNITYLNPCRHGHIPKPPDGVVIPKK 720

Query: 357  ILKAIDIKPSPVLWHEDNVGRGQQGRESPQVPGSIAGSQLGEAAHRLVKN 506
            I+K IDIKPSPVLWHEDNVGRGQQGRE  QVPG+I GSQLGEAAHRLVKN
Sbjct: 721  IIKDIDIKPSPVLWHEDNVGRGQQGRERSQVPGAITGSQLGEAAHRLVKN 770


>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 931

 Score =  272 bits (696), Expect = 2e-71
 Identities = 131/168 (77%), Positives = 149/168 (88%)
 Frame = +3

Query: 3    KIEDSLTEEEQLQNSMMLNLLYVNRAHDLASHILLHYQVYGQSPAHERCVSPINTNASGG 182
            +IED+LTEEEQL+NS+ML+LLYVNRAH+LA+HIL +Y V  Q P HERCV PI+TNASGG
Sbjct: 591  RIEDTLTEEEQLRNSVMLDLLYVNRAHNLAAHILSYYHVCSQLPPHERCVQPIDTNASGG 650

Query: 183  MNGYLYLCERNVLSSIVSSPIDGLPDIECNQVLNITYLNPCRHGHIPKLPDGVLIPKKIL 362
            MNGYL+LCERNV SS++SSPI GL DIE NQVLNIT+LNP RH HIPK PDGV+IPKK+L
Sbjct: 651  MNGYLWLCERNVFSSVISSPISGLQDIEYNQVLNITFLNPRRHDHIPKPPDGVVIPKKVL 710

Query: 363  KAIDIKPSPVLWHEDNVGRGQQGRESPQVPGSIAGSQLGEAAHRLVKN 506
            KAIDIKP PVLWHEDN+G+ QQ RE  QVPG+IAGSQLGEAAHRLVKN
Sbjct: 711  KAIDIKPFPVLWHEDNIGQRQQARERLQVPGAIAGSQLGEAAHRLVKN 758


>ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 960

 Score =  230 bits (587), Expect = 8e-59
 Identities = 120/168 (71%), Positives = 136/168 (80%)
 Frame = +3

Query: 3    KIEDSLTEEEQLQNSMMLNLLYVNRAHDLASHILLHYQVYGQSPAHERCVSPINTNASGG 182
            K+E +LTEEEQL+NS ML+LLYV+ AH+LA HIL ++Q   Q P HER   PI+  AS G
Sbjct: 598  KLEATLTEEEQLRNSKMLDLLYVSSAHNLAPHILSYHQYSCQLPLHERPALPIDPRASDG 657

Query: 183  MNGYLYLCERNVLSSIVSSPIDGLPDIECNQVLNITYLNPCRHGHIPKLPDGVLIPKKIL 362
            MNGYL+L ERNVL + VSSPI GL DIE NQVLNITYLNP +H HIPK PDGVL+PKKIL
Sbjct: 658  MNGYLWLYERNVLRTTVSSPIKGLQDIEFNQVLNITYLNPRKHRHIPKPPDGVLMPKKIL 717

Query: 363  KAIDIKPSPVLWHEDNVGRGQQGRESPQVPGSIAGSQLGEAAHRLVKN 506
            KAIDIKP PVLWHEDN GR +QGRE  QV G++AG QLGEAAHRLVKN
Sbjct: 718  KAIDIKPFPVLWHEDNSGR-RQGRERQQVHGAMAGPQLGEAAHRLVKN 764


>ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 957

 Score =  228 bits (582), Expect = 3e-58
 Identities = 120/168 (71%), Positives = 136/168 (80%)
 Frame = +3

Query: 3    KIEDSLTEEEQLQNSMMLNLLYVNRAHDLASHILLHYQVYGQSPAHERCVSPINTNASGG 182
            K+E +LTEEEQL+NS ML+LLYV+ AH+LA HIL +YQ   Q P HER   PI+   S G
Sbjct: 596  KLEATLTEEEQLRNSKMLDLLYVSSAHNLAPHILSYYQYSCQLPLHERPAQPIDPRVSDG 655

Query: 183  MNGYLYLCERNVLSSIVSSPIDGLPDIECNQVLNITYLNPCRHGHIPKLPDGVLIPKKIL 362
            MNGYL+L ERNVL +IVSSPI GL DIE NQVLNITYLNP +H HIPK PDGVL+PKKIL
Sbjct: 656  MNGYLWLYERNVLRTIVSSPIKGLQDIEFNQVLNITYLNPRKHRHIPKAPDGVLMPKKIL 715

Query: 363  KAIDIKPSPVLWHEDNVGRGQQGRESPQVPGSIAGSQLGEAAHRLVKN 506
            KAIDIKP PVLWHE+N GR +QGRE  QV G++AG QLGEAAHRLVKN
Sbjct: 716  KAIDIKPFPVLWHEENSGR-RQGRER-QVHGAMAGPQLGEAAHRLVKN 761


>ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 956

 Score =  221 bits (564), Expect = 4e-56
 Identities = 111/167 (66%), Positives = 131/167 (78%)
 Frame = +3

Query: 6    IEDSLTEEEQLQNSMMLNLLYVNRAHDLASHILLHYQVYGQSPAHERCVSPINTNASGGM 185
            +E +LTEEEQL+NS ML+LLYV+RAH L  HIL +YQ Y   P  +R V PI+ +AS GM
Sbjct: 597  LEGTLTEEEQLRNSKMLDLLYVSRAHKLVPHILFYYQNYSHLPHQQRPVLPIDPSASDGM 656

Query: 186  NGYLYLCERNVLSSIVSSPIDGLPDIECNQVLNITYLNPCRHGHIPKLPDGVLIPKKILK 365
            NG+L+  ERNV  ++VSSPI GL DI CNQVLNITYLNP  H HIPK PDGV++P+KIL+
Sbjct: 657  NGFLWSYERNVFRTVVSSPIKGLQDIACNQVLNITYLNPRTHRHIPKPPDGVVMPQKILR 716

Query: 366  AIDIKPSPVLWHEDNVGRGQQGRESPQVPGSIAGSQLGEAAHRLVKN 506
            A+DIKP PVLWHEDN  R  Q RE  QVPG+IAG QLGEAAHRLV+N
Sbjct: 717  ALDIKPLPVLWHEDN-SRRHQARERQQVPGAIAGPQLGEAAHRLVRN 762


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