BLASTX nr result

ID: Glycyrrhiza23_contig00030411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030411
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30

>ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/96 (84%), Positives = 90/96 (93%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           GQKPDSITLVSVLPAV D+KALRIGRSIHGYAFR+GFE MVNV+TA+LD YFKCGSV++ 
Sbjct: 238 GQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSA 297

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATFL 290
           RLVF+ M S++VVSWNTMIDGYAQNGESEEAFATFL
Sbjct: 298 RLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFL 333



 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/93 (46%), Positives = 59/93 (63%)
 Frame = +3

Query: 9   KPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTPRL 188
           KPDS TLVSV+ A+ D+   R  + IHG A R+  +  V V TAL+D + KCG+++T R 
Sbjct: 442 KPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARK 501

Query: 189 VFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
           +F+ M  + V++WN MIDGY  NG   EA   F
Sbjct: 502 LFDLMQERHVITWNAMIDGYGTNGHGREALDLF 534



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/75 (42%), Positives = 47/75 (62%)
 Frame = +3

Query: 66  LRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTPRLVFERMGSKSVVSWNTMIDG 245
           LR GR IHG    +GF+S +   TA++++Y KC  ++    +FERM  + +VSWNT++ G
Sbjct: 158 LRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAG 217

Query: 246 YAQNGESEEAFATFL 290
           YAQNG +  A    L
Sbjct: 218 YAQNGFARRAVQVVL 232



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/95 (35%), Positives = 49/95 (51%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           G +P +++++  L A  ++  L  GR +H           V+V  +L+ MY KC  V   
Sbjct: 339 GVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIA 398

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
             VF  +  K+VV+WN MI GYAQNG   EA   F
Sbjct: 399 ASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLF 433


>ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/96 (83%), Positives = 88/96 (91%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           GQKPDS+TLVS+LPAV D+KALRIGRSIHGYAFRSGFES+VNV+ ALLDMYFKCGS +  
Sbjct: 241 GQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIA 300

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATFL 290
           RLVF+ M SK+VVSWNTMIDG AQNGESEEAFATFL
Sbjct: 301 RLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFL 336



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           G K D  TLV V+ A+ D    R  + IHG A R+  ++ V VSTAL+DMY KCG++KT 
Sbjct: 442 GIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTA 501

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
           R +F+ M  + V++WN MIDGY  +G  +E    F
Sbjct: 502 RKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLF 536



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/75 (44%), Positives = 46/75 (61%)
 Frame = +3

Query: 66  LRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTPRLVFERMGSKSVVSWNTMIDG 245
           L+ GR IHG    +GFES + V TA++ +Y KC  +     +FERM  K +VSW T++ G
Sbjct: 161 LKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAG 220

Query: 246 YAQNGESEEAFATFL 290
           YAQNG ++ A    L
Sbjct: 221 YAQNGHAKRALQLVL 235



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/95 (35%), Positives = 51/95 (53%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           G+ P  +T++ VL A  ++  L  G  +H    +   +S V+V  +L+ MY KC  V   
Sbjct: 342 GEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIA 401

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
             +F  +  K+ V+WN MI GYAQNG  +EA   F
Sbjct: 402 ASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLF 435


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/95 (68%), Positives = 79/95 (83%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           G++PDSIT+VS+LPAV D+ +LRIGRSIHGY+ R+GFES VNVSTAL+DMY KCGSV T 
Sbjct: 271 GKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTA 330

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
           RL+F+RM  K+VVSWN+MIDGY QNG+   A   F
Sbjct: 331 RLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIF 365



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/93 (45%), Positives = 59/93 (63%)
 Frame = +3

Query: 9   KPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTPRL 188
           KPDS T+VSV+PA+ ++  L   + IHG   R+  +  V V+TAL+DMY KCG+V T R 
Sbjct: 475 KPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARK 534

Query: 189 VFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
           +F+ M  + V +WN MIDGY  +G  + A   F
Sbjct: 535 LFDMMDERHVTTWNAMIDGYGTHGLGKAALELF 567



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/90 (37%), Positives = 49/90 (54%)
 Frame = +3

Query: 18  SITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTPRLVFE 197
           ++T++  L A  D+  +  GR +H    +    S V+V  +L+ MY KC  V     +FE
Sbjct: 377 NVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFE 436

Query: 198 RMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
            +  K++VSWN MI GYAQNG   EA   F
Sbjct: 437 NLQHKTLVSWNAMILGYAQNGRINEAIDYF 466



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/96 (36%), Positives = 49/96 (51%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           G +P       +L    D   LR G+ IH     +GF S V   T +++MY KC  V+  
Sbjct: 170 GVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEA 229

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATFL 290
             +F+RM  + +V WNT+I GYAQNG  + A    L
Sbjct: 230 YKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVL 265


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/95 (65%), Positives = 77/95 (81%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           GQ+PDSITLV+VLPA  D+  L +G+SIHGYA R+GF  +VN+STAL DMY KCGSV+T 
Sbjct: 243 GQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETA 302

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
           RL+F+ M  K+VVSWN+M+DGY QNGE E+A A F
Sbjct: 303 RLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVF 337



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/95 (42%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           G KPDS T+VSV+PA+ ++   R  + IHG   RS  +  + V+TAL+DMY KCG++   
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
           R +F+ +  + V++WN MIDGY  +G    A   F
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLF 539



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/95 (34%), Positives = 49/95 (51%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           G  P  +T++  L A  D+  L  G+ +H +  +    S ++V  +L+ MY KC  V   
Sbjct: 344 GIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIA 403

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
             +F  +  ++ VSWN MI GYAQNG   EA   F
Sbjct: 404 SDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCF 438



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/94 (32%), Positives = 50/94 (53%)
 Frame = +3

Query: 9   KPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTPRL 188
           KP       +L    D   L+ G+ IHG    + F + V   T +++MY KC  +     
Sbjct: 144 KPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYK 203

Query: 189 VFERMGSKSVVSWNTMIDGYAQNGESEEAFATFL 290
           +F+RM  + +VSWNT+I G++QNG +++A    L
Sbjct: 204 MFDRMPERDLVSWNTIIAGFSQNGFAKKALELVL 237


>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/95 (65%), Positives = 77/95 (81%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           GQ+PDSITLV+VLPA  D+  L +G+SIHGYA R+GF  +VN+STAL DMY KCGSV+T 
Sbjct: 243 GQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETA 302

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
           RL+F+ M  K+VVSWN+M+DGY QNGE E+A A F
Sbjct: 303 RLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVF 337



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/95 (42%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           G KPDS T+VSV+PA+ ++   R  + IHG   RS  +  + V+TAL+DMY KCG++   
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
           R +F+ +  + V++WN MIDGY  +G    A   F
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLF 539



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/95 (34%), Positives = 49/95 (51%)
 Frame = +3

Query: 3   GQKPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTP 182
           G  P  +T++  L A  D+  L  G+ +H +  +    S ++V  +L+ MY KC  V   
Sbjct: 344 GIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIA 403

Query: 183 RLVFERMGSKSVVSWNTMIDGYAQNGESEEAFATF 287
             +F  +  ++ VSWN MI GYAQNG   EA   F
Sbjct: 404 SDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCF 438



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/94 (32%), Positives = 50/94 (53%)
 Frame = +3

Query: 9   KPDSITLVSVLPAVTDIKALRIGRSIHGYAFRSGFESMVNVSTALLDMYFKCGSVKTPRL 188
           KP       +L    D   L+ G+ IHG    + F + V   T +++MY KC  +     
Sbjct: 144 KPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYK 203

Query: 189 VFERMGSKSVVSWNTMIDGYAQNGESEEAFATFL 290
           +F+RM  + +VSWNT+I G++QNG +++A    L
Sbjct: 204 MFDRMPERDLVSWNTIIAGFSQNGFAKKALELVL 237


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