BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030382
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO80460.1| RNA-directed DNA polymerase ; Ribonuclease H, put...    75   6e-12
gb|ABN06088.1| RNA-directed DNA polymerase ; Ribonuclease H, put...    73   3e-11
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    70   2e-10
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          64   2e-08
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              57   1e-06

>gb|ABO80460.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
           truncatula]
          Length = 311

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   SDHNPLLLSCMK-SQSRKSSLFHFQAFWISHPDYEAVVDNAWKSVEGNAIKKLRRVKDKS 177
           SDHN +LL      QSR    F F+A WI H DY  +V NAW S   +    L +V++ S
Sbjct: 186 SDHNLILLRFGGLPQSRGHRPFRFEAAWIGHVDYANLVSNAWNSSNHSTSVALNKVRENS 245

Query: 178 LAFNRDVFGNIFKNKRILEARL 243
           + FN+DVFGNIFK KR +E RL
Sbjct: 246 IIFNKDVFGNIFKRKRHIENRL 267


>gb|ABN06088.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
           truncatula]
          Length = 117

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   SDHNPLLLSCMKSQ-SRKSSLFHFQAFWISHPDYEAVVDNAWKSVEGNAIKKLRRVKDKS 177
           SDHN +LL       +R    FHF+A WI H  Y  +V NAW S   N    L +V++ S
Sbjct: 14  SDHNLILLRFGGLPLTRGPRPFHFEAAWIDHESYSDLVVNAWNSSNHNPTVALNKVREHS 73

Query: 178 LAFNRDVFGNIFKNKRILEARLVGIHQQLD 267
           + FN++VFGNIFK KR +E R  GI   L+
Sbjct: 74  IIFNQEVFGNIFKRKRQVERRSKGIQIYLE 103


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   SDHNPLLLSCMKSQ-SRKSSLFHFQAFWISHPDYEAVVDNAWKSVEGNAIKKLRRVKDKS 177
           SDHNPLLL       +R    F F+A WI H DY  VV  +W +   N    L +V + S
Sbjct: 221 SDHNPLLLRFGGLPLTRGPRPFRFEAAWIDHYDYGNVVKRSWSTHTHNPTASLIKVMENS 280

Query: 178 LAFNRDVFGNIFKNKRILEARLVGIHQQLD 267
           + FN DVFGNIF+ K  +E RL G+   L+
Sbjct: 281 IIFNHDVFGNIFQRKSRVEWRLKGVQSYLE 310


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1   SDHNPLLLSCM-KSQSRKSSLFHFQAFWISHPDYEAVVDNAWKSVEGNAIKKLRRVKDKS 177
           SDH P+L+ C  + Q + +  F F A W +HP Y  +V+ +W S       KL  V+  S
Sbjct: 621 SDHCPILVRCKGRPQPKGNRPFRFIAAWATHPGYRDIVNQSWWSGNRGIHGKLSEVQKNS 680

Query: 178 LAFNRDVFGNIFKNKRILEARLVGIHQQLDI 270
           L FN  VFGNIF  K  LE ++  + ++L++
Sbjct: 681 LEFNSKVFGNIFVKKCELEQQINYLQKRLEV 711


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1   SDHNPLLLSCMKSQSRKSSL--FHFQAFWISHPDYEAVVDNAWKSVEGNAIKKLRRVKDK 174
           SDHNP+L           SL    F+A W++  DY+ +   A +    N    +  V  K
Sbjct: 222 SDHNPILFLDEAGNPPVRSLRPVRFEAAWLTSEDYKHIWKEATEREGSNLEDIIATVTQK 281

Query: 175 SLAFNRDVFGNIFKNKRILEARLVGIHQ 258
           SL +NR+VFGNIF  KR +E R++GI +
Sbjct: 282 SLLWNRNVFGNIFNRKRKIENRILGIQR 309