BLASTX nr result

ID: Glycyrrhiza23_contig00030377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030377
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    59   3e-07
gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japo...    58   7e-07
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    58   7e-07

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/95 (35%), Positives = 48/95 (50%)
 Frame = -2

Query: 285  RNTKFFHATTLXXXXXXXXXXXXDSHGNWVEGKEDVFKAVLEHF*GVYLAGDISNVENCL 106
            +N+ FFH TT+            D HGNW++ + DV    L++F  +Y +      E  L
Sbjct: 959  QNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSNGPQQWEEVL 1018

Query: 105  QCVPRLVTEEMDRKLMAPVDDEEIKDAVSGLGALK 1
              V   VT EM++ L +PV   E+K AV  LGA K
Sbjct: 1019 DFVDTAVTAEMNKILSSPVSLLEVKKAVFDLGATK 1053


>gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
          Length = 915

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/95 (33%), Positives = 48/95 (50%)
 Frame = -2

Query: 285 RNTKFFHATTLXXXXXXXXXXXXDSHGNWVEGKEDVFKAVLEHF*GVYLAGDISNVENCL 106
           RNT FFHAT                 G+WVE +E+    ++++F  ++ +    + E  L
Sbjct: 562 RNTSFFHATCSERKRSNRIGRLKKEDGSWVESEEEKKSFIMQYFKNMFQSNGCQHPERLL 621

Query: 105 QCVPRLVTEEMDRKLMAPVDDEEIKDAVSGLGALK 1
             V + VTEEM+  LMA    EEIK ++  +G LK
Sbjct: 622 SKVKKKVTEEMNECLMAEFIVEEIKTSIDSIGDLK 656


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
           gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
           Japonica Group]
          Length = 1453

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/95 (33%), Positives = 48/95 (50%)
 Frame = -2

Query: 285 RNTKFFHATTLXXXXXXXXXXXXDSHGNWVEGKEDVFKAVLEHF*GVYLAGDISNVENCL 106
           RNT FFHAT                 G+WVE +E+    ++++F  ++ +    + E  L
Sbjct: 599 RNTSFFHATCSERKRSNRIGRLKKEDGSWVESEEEKKSFIMQYFKNMFQSNGCQHPERLL 658

Query: 105 QCVPRLVTEEMDRKLMAPVDDEEIKDAVSGLGALK 1
             V + VTEEM+  LMA    EEIK ++  +G LK
Sbjct: 659 SKVKKKVTEEMNECLMAEFIVEEIKTSIDSIGDLK 693


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