BLASTX nr result

ID: Glycyrrhiza23_contig00030367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030367
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt...   187   8e-46
ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synt...   186   2e-45
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   168   4e-40
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   163   2e-38
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   160   1e-37

>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
           max]
          Length = 687

 Score =  187 bits (475), Expect = 8e-46
 Identities = 92/101 (91%), Positives = 97/101 (96%)
 Frame = +2

Query: 2   LIGAALFRGEWKLAVDMILDPRDGERNAIAKARKYYKDSNDVVGTLKQLPRYLVAERAVL 181
           LIGAAL RGEWKLAVDMILDPRDGE++AIAKARKYYK+S+DVVGTLKQLPRYLVAERAVL
Sbjct: 324 LIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAERAVL 383

Query: 182 QGLKKSPGNYLQALKSIPRTLRMMYVHSYQSYLWNHAASTR 304
           Q LK SPGNYLQALKSIPRTLRM+YVHSYQSYLWNHAAS R
Sbjct: 384 QTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKR 424


>ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
           max]
          Length = 687

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/101 (90%), Positives = 97/101 (96%)
 Frame = +2

Query: 2   LIGAALFRGEWKLAVDMILDPRDGERNAIAKARKYYKDSNDVVGTLKQLPRYLVAERAVL 181
           LIGAAL +GEWKLAVDMILDPRDGE++AIAKARKYYK+S+DVVGTLKQLPRYLVAERAVL
Sbjct: 324 LIGAALLQGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAERAVL 383

Query: 182 QGLKKSPGNYLQALKSIPRTLRMMYVHSYQSYLWNHAASTR 304
           Q LK SPGNYLQALKSIPRTLRM+YVHSYQSYLWNHAAS R
Sbjct: 384 QTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKR 424


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
           vinifera]
          Length = 694

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/101 (79%), Positives = 92/101 (91%)
 Frame = +2

Query: 2   LIGAALFRGEWKLAVDMILDPRDGERNAIAKARKYYKDSNDVVGTLKQLPRYLVAERAVL 181
           LIGAAL RGEW+ AV +ILDPR+GER+AI KAR+YYK+S+D+ GTL+Q PR+LVAERA+L
Sbjct: 323 LIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGTLRQFPRHLVAERAIL 382

Query: 182 QGLKKSPGNYLQALKSIPRTLRMMYVHSYQSYLWNHAASTR 304
           Q LKK PGNYLQALK+IPRTLRMMYVHSYQSYLWNHAAS R
Sbjct: 383 QCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMR 423


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
           sativus]
          Length = 719

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/101 (77%), Positives = 90/101 (89%)
 Frame = +2

Query: 2   LIGAALFRGEWKLAVDMILDPRDGERNAIAKARKYYKDSNDVVGTLKQLPRYLVAERAVL 181
           L+GA+L RGEWK AV+MILDPR+G+   + +AR YYK+S+D+ GTLKQLPRYLVAERA+L
Sbjct: 362 LVGASLLRGEWKGAVNMILDPREGDILLLMRARDYYKESDDIDGTLKQLPRYLVAERAIL 421

Query: 182 QGLKKSPGNYLQALKSIPRTLRMMYVHSYQSYLWNHAASTR 304
           Q LKK PGNYLQALK+IPRTLRMMYVHSYQSYLWNHAAS R
Sbjct: 422 QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMR 462


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
           gi|52354299|gb|AAU44470.1| hypothetical protein
           AT3G04820 [Arabidopsis thaliana]
           gi|61742699|gb|AAX55170.1| hypothetical protein
           At3g04820 [Arabidopsis thaliana]
           gi|332640619|gb|AEE74140.1| pseudouridine synthase
           [Arabidopsis thaliana]
          Length = 715

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/100 (76%), Positives = 88/100 (88%)
 Frame = +2

Query: 5   IGAALFRGEWKLAVDMILDPRDGERNAIAKARKYYKDSNDVVGTLKQLPRYLVAERAVLQ 184
           +GAAL +GEWK AVDMILDPR+ ER+ +  AR+YYK++ D+ GTL+QLPRYLVAERA+LQ
Sbjct: 362 VGAALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQ 421

Query: 185 GLKKSPGNYLQALKSIPRTLRMMYVHSYQSYLWNHAASTR 304
            LKK PGNYLQALK IPRTLRMMYVHSYQSYLWN+AAS R
Sbjct: 422 CLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLR 461


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