BLASTX nr result

ID: Glycyrrhiza23_contig00030362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030362
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   105   4e-21
ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   104   9e-21
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19

>ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Glycine max]
          Length = 496

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/84 (85%), Positives = 79/84 (94%)
 Frame = -1

Query: 253 DEAIISMKRALAMLKDCRWRPPHGLVLAIAEYLEKHGNFEYANEYITDIHNLGIGSLSLY 74
           DEAII+MKRALAM+KDC WRPPHG+VLAIAEYLEK GN EYA++YITDIHNLG+ SLSLY
Sbjct: 396 DEAIITMKRALAMMKDCHWRPPHGIVLAIAEYLEKDGNLEYADKYITDIHNLGLVSLSLY 455

Query: 73  KILLRMHLSANKPPFQILKMMDED 2
           K+LLRMHLSANKPPF ILKMMDED
Sbjct: 456 KVLLRMHLSANKPPFHILKMMDED 479


>ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Glycine max]
          Length = 530

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/84 (84%), Positives = 77/84 (91%)
 Frame = -1

Query: 253 DEAIISMKRALAMLKDCRWRPPHGLVLAIAEYLEKHGNFEYANEYITDIHNLGIGSLSLY 74
           DEAII+MKRALAM+KDC WRPPHGLVLAIAEYLEK GN +YAN+YITD+ N G+ SLSLY
Sbjct: 421 DEAIITMKRALAMMKDCHWRPPHGLVLAIAEYLEKDGNLKYANKYITDLRNFGLFSLSLY 480

Query: 73  KILLRMHLSANKPPFQILKMMDED 2
           KILLRMHLSANKPPF ILKMMDED
Sbjct: 481 KILLRMHLSANKPPFHILKMMDED 504


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/84 (55%), Positives = 67/84 (79%)
 Frame = -1

Query: 253 DEAIISMKRALAMLKDCRWRPPHGLVLAIAEYLEKHGNFEYANEYITDIHNLGIGSLSLY 74
           D+AI +M +A++ML+ C WRP HG++++IAE+LE++ NFE AN +I  IH+LG+ SL LY
Sbjct: 394 DKAIDAMTQAISMLEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQVIHHLGVASLPLY 453

Query: 73  KILLRMHLSANKPPFQILKMMDED 2
           K+LLRMHL A +  F ILKMM++D
Sbjct: 454 KVLLRMHLHAQRAAFDILKMMEKD 477


>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/84 (58%), Positives = 60/84 (71%)
 Frame = -1

Query: 253 DEAIISMKRALAMLKDCRWRPPHGLVLAIAEYLEKHGNFEYANEYITDIHNLGIGSLSLY 74
           D+AI +MK+  +MLK C WRP HGLV AIA YLE+HGN    N+Y+  IH LG+  L LY
Sbjct: 375 DKAINAMKKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKVIHQLGVAKLPLY 434

Query: 73  KILLRMHLSANKPPFQILKMMDED 2
           K LLRMHL   +P F ILKMM++D
Sbjct: 435 KSLLRMHLLFQRPVFDILKMMEKD 458


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  100 bits (250), Expect = 1e-19
 Identities = 46/86 (53%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
 Frame = -1

Query: 253 DEAIISMKRALAMLK--DCRWRPPHGLVLAIAEYLEKHGNFEYANEYITDIHNLGIGSLS 80
           D+AI +MK+  ++LK   C WRP H +++AIAE+ EKHGNFE AN YI  +H LG+ +L 
Sbjct: 410 DKAIDAMKKGFSVLKVERCDWRPSHSILMAIAEHFEKHGNFEDANHYIKAVHGLGVATLP 469

Query: 79  LYKILLRMHLSANKPPFQILKMMDED 2
           LYK+ LRM+L+A +P + ILKMM++D
Sbjct: 470 LYKLFLRMYLNAQRPAWDILKMMEKD 495


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