BLASTX nr result
ID: Glycyrrhiza23_contig00030362
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00030362 (292 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containi... 154 9e-36 ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containi... 150 1e-34 ref|XP_002513996.1| pentatricopeptide repeat-containing protein,... 105 4e-21 ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi... 104 9e-21 ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2... 100 1e-19 >ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like [Glycine max] Length = 496 Score = 154 bits (388), Expect = 9e-36 Identities = 72/84 (85%), Positives = 79/84 (94%) Frame = -1 Query: 253 DEAIISMKRALAMLKDCRWRPPHGLVLAIAEYLEKHGNFEYANEYITDIHNLGIGSLSLY 74 DEAII+MKRALAM+KDC WRPPHG+VLAIAEYLEK GN EYA++YITDIHNLG+ SLSLY Sbjct: 396 DEAIITMKRALAMMKDCHWRPPHGIVLAIAEYLEKDGNLEYADKYITDIHNLGLVSLSLY 455 Query: 73 KILLRMHLSANKPPFQILKMMDED 2 K+LLRMHLSANKPPF ILKMMDED Sbjct: 456 KVLLRMHLSANKPPFHILKMMDED 479 >ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like [Glycine max] Length = 530 Score = 150 bits (378), Expect = 1e-34 Identities = 71/84 (84%), Positives = 77/84 (91%) Frame = -1 Query: 253 DEAIISMKRALAMLKDCRWRPPHGLVLAIAEYLEKHGNFEYANEYITDIHNLGIGSLSLY 74 DEAII+MKRALAM+KDC WRPPHGLVLAIAEYLEK GN +YAN+YITD+ N G+ SLSLY Sbjct: 421 DEAIITMKRALAMMKDCHWRPPHGLVLAIAEYLEKDGNLKYANKYITDLRNFGLFSLSLY 480 Query: 73 KILLRMHLSANKPPFQILKMMDED 2 KILLRMHLSANKPPF ILKMMDED Sbjct: 481 KILLRMHLSANKPPFHILKMMDED 504 >ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 496 Score = 105 bits (262), Expect = 4e-21 Identities = 47/84 (55%), Positives = 67/84 (79%) Frame = -1 Query: 253 DEAIISMKRALAMLKDCRWRPPHGLVLAIAEYLEKHGNFEYANEYITDIHNLGIGSLSLY 74 D+AI +M +A++ML+ C WRP HG++++IAE+LE++ NFE AN +I IH+LG+ SL LY Sbjct: 394 DKAIDAMTQAISMLEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQVIHHLGVASLPLY 453 Query: 73 KILLRMHLSANKPPFQILKMMDED 2 K+LLRMHL A + F ILKMM++D Sbjct: 454 KVLLRMHLHAQRAAFDILKMMEKD 477 >ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like [Vitis vinifera] Length = 475 Score = 104 bits (259), Expect = 9e-21 Identities = 49/84 (58%), Positives = 60/84 (71%) Frame = -1 Query: 253 DEAIISMKRALAMLKDCRWRPPHGLVLAIAEYLEKHGNFEYANEYITDIHNLGIGSLSLY 74 D+AI +MK+ +MLK C WRP HGLV AIA YLE+HGN N+Y+ IH LG+ L LY Sbjct: 375 DKAINAMKKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKVIHQLGVAKLPLY 434 Query: 73 KILLRMHLSANKPPFQILKMMDED 2 K LLRMHL +P F ILKMM++D Sbjct: 435 KSLLRMHLLFQRPVFDILKMMEKD 458 >ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa] Length = 511 Score = 100 bits (250), Expect = 1e-19 Identities = 46/86 (53%), Positives = 65/86 (75%), Gaps = 2/86 (2%) Frame = -1 Query: 253 DEAIISMKRALAMLK--DCRWRPPHGLVLAIAEYLEKHGNFEYANEYITDIHNLGIGSLS 80 D+AI +MK+ ++LK C WRP H +++AIAE+ EKHGNFE AN YI +H LG+ +L Sbjct: 410 DKAIDAMKKGFSVLKVERCDWRPSHSILMAIAEHFEKHGNFEDANHYIKAVHGLGVATLP 469 Query: 79 LYKILLRMHLSANKPPFQILKMMDED 2 LYK+ LRM+L+A +P + ILKMM++D Sbjct: 470 LYKLFLRMYLNAQRPAWDILKMMEKD 495