BLASTX nr result

ID: Glycyrrhiza23_contig00030357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030357
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_003621319.1| Pentatricopeptide repeat-containing protein ...    57   1e-06

>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +2

Query: 2   QFTVFDQSHPKSEDIYDMVDRLVQDLRQVGYVPGIHR 112
           +FTVFDQSHPKS+DIY M+DRLVQDLRQVGYVP IH+
Sbjct: 568 EFTVFDQSHPKSDDIYQMIDRLVQDLRQVGYVPMIHQ 604


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +2

Query: 2   QFTVFDQSHPKSEDIYDMVDRLVQDLRQVGYVPGIHR 112
           +FTVFDQSHPKS+DIY M+DRLVQDLRQVGYVP IH+
Sbjct: 568 EFTVFDQSHPKSDDIYKMIDRLVQDLRQVGYVPMIHQ 604


>ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496334|gb|AES77537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 605

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +2

Query: 2   QFTVFDQSHPKSEDIYDMVDRLVQDLRQVGYVP 100
           +FTV D SHPKS DIY+M+DRLV DLRQVGYVP
Sbjct: 570 EFTVRDWSHPKSGDIYNMIDRLVHDLRQVGYVP 602


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