BLASTX nr result

ID: Glycyrrhiza23_contig00030355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030355
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629138.1| TMV resistance protein N [Medicago truncatul...    98   8e-19
ref|XP_003626930.1| TMV resistance protein N [Medicago truncatul...    96   4e-18
ref|XP_003621940.1| TMV resistance protein N [Medicago truncatul...    82   4e-14
ref|XP_003626909.1| Resistance protein MG55 [Medicago truncatula...    81   8e-14
ref|XP_003626910.1| hypothetical protein MTR_8g011920 [Medicago ...    80   2e-13

>ref|XP_003629138.1| TMV resistance protein N [Medicago truncatula]
            gi|355523160|gb|AET03614.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1084

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -2

Query: 281  IYVSFGHGLNVKETAVYLIYGQSTTMEFEPS-VMEIEPATEVIMEPSPEVKVHPSPDVKM 105
            ++V+ GHGL VKETAVYL+Y QS  ME  PS +MEIEP  EV M+PSP VK  PS +  +
Sbjct: 982  VFVAIGHGLTVKETAVYLVYDQSNAMEIVPSNIMEIEPLHEVEMQPSPNVKTEPSAEEDV 1041

Query: 104  XXXXXXXXXXXPNVKKEPLPKPNKKIYTRLAKRV 3
                         VK EP+PK N+KI+TRLAKR+
Sbjct: 1042 QPSLDVKTEPLLVVKNEPIPKTNRKIFTRLAKRL 1075


>ref|XP_003626930.1| TMV resistance protein N [Medicago truncatula]
            gi|355520952|gb|AET01406.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1091

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -2

Query: 281  IYVSFGHGLNVKETAVYLIYGQSTTMEFEPSV-MEIEPATEVIMEPSPEVKVHPSPDVKM 105
            I+V+FGHGL  KETAVYLIY QST ME E S+ ME+EP  EV ++ SP+V +  SP V+ 
Sbjct: 989  IFVAFGHGLTAKETAVYLIYDQSTAMEIESSIAMEVEPIPEVQVQSSPDVVMELSPGVEA 1048

Query: 104  XXXXXXXXXXXPNVKKEPLPKPNKKIYTRLAKRV 3
                         VK EP+PKPN KI+ +LAKRV
Sbjct: 1049 QPSSDVETESPIAVKSEPIPKPNDKIFVKLAKRV 1082


>ref|XP_003621940.1| TMV resistance protein N [Medicago truncatula]
            gi|355496955|gb|AES78158.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1093

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
 Frame = -2

Query: 281  IYVSFGHGLNVKETAVYLIYGQSTTMEFEPSVMEI--EPATEVIMEPSPEVKVHPSPDVK 108
            I+V+F HGL VKETAVYLIY QS+T E E S++E+  EP  EV  + S +VK  PSP+V+
Sbjct: 998  IFVTFRHGLTVKETAVYLIYSQSSTREIE-SILEVEAEPTPEVEAQSSTDVKAEPSPEVE 1056

Query: 107  MXXXXXXXXXXXPNVKKEPLPKPNKKIYTRLAKRV 3
                        P++K EPLPKPN+ I+ R AK V
Sbjct: 1057 -------EQPSPPDLKMEPLPKPNQNIFIRFAKGV 1084


>ref|XP_003626909.1| Resistance protein MG55 [Medicago truncatula]
           gi|355520931|gb|AET01385.1| Resistance protein MG55
           [Medicago truncatula]
          Length = 614

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 9/94 (9%)
 Frame = -2

Query: 281 IYVSFGHGLNVKETAVYLIYGQSTTMEFEPS-VMEIEPAT--------EVIMEPSPEVKV 129
           I+V FGHGL VKET+VYLIYGQSTT EFE S +ME+EP+T        EV M PSPEV +
Sbjct: 447 IFVVFGHGLIVKETSVYLIYGQSTTKEFEQSFIMEVEPSTNMKLEPWAEVSMPPSPEVNL 506

Query: 128 HPSPDVKMXXXXXXXXXXXPNVKKEPLPKPNKKI 27
             SP+V++            N++ EPL + N ++
Sbjct: 507 QLSPNVEVEASITVEVDSSTNMEMEPLAEVNAQL 540


>ref|XP_003626910.1| hypothetical protein MTR_8g011920 [Medicago truncatula]
           gi|355520932|gb|AET01386.1| hypothetical protein
           MTR_8g011920 [Medicago truncatula]
          Length = 271

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 51/125 (40%), Positives = 61/125 (48%), Gaps = 32/125 (25%)
 Frame = -2

Query: 281 IYVSFGHGLNVKETAVYLIYGQSTTMEFEPS-VMEIEPATEVIMEPSPEVKVHPSPDVKM 105
           I+V  GHG  VKET VYLIY QS  ME E S  ME++P+T+  MEP  EV+  PSP+VK 
Sbjct: 138 IFVVIGHGWTVKETNVYLIYDQSNAMEIESSNTMEVDPSTDAKMEPLHEVEFQPSPNVKT 197

Query: 104 XXXXXXXXXXXPN-------------------------------VKKEPLPKPNKKIYTR 18
                       N                               VK EPLPK ++KI+TR
Sbjct: 198 ETSAEVEIQPSLNLKTEPSAEEEVQLSPNVKMEPSLVINNERLVVKNEPLPKTSRKIFTR 257

Query: 17  LAKRV 3
           LAKRV
Sbjct: 258 LAKRV 262


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