BLASTX nr result

ID: Glycyrrhiza23_contig00030354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030354
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527835.1| PREDICTED: lissencephaly-1 homolog [Glycine ...   174   5e-42
ref|XP_003523738.1| PREDICTED: LOW QUALITY PROTEIN: lissencephal...   173   1e-41
ref|XP_002281362.2| PREDICTED: uncharacterized WD repeat-contain...   162   2e-38
emb|CBI20863.3| unnamed protein product [Vitis vinifera]              162   2e-38
emb|CAN66946.1| hypothetical protein VITISV_020093 [Vitis vinifera]   162   2e-38

>ref|XP_003527835.1| PREDICTED: lissencephaly-1 homolog [Glycine max]
          Length = 457

 Score =  174 bits (442), Expect = 5e-42
 Identities = 81/85 (95%), Positives = 83/85 (97%)
 Frame = +1

Query: 1   VSCMAYYHSEGLLYTGSHDRTVKAWRISDRKCVDSFVAHEDNINAILVNQDDGCLFTCSS 180
           VSCMAYYHSEGLLYTGSHDRTVKAWR+SDRKCVDSFVAHEDN+NAILVNQDDGCLFT SS
Sbjct: 194 VSCMAYYHSEGLLYTGSHDRTVKAWRVSDRKCVDSFVAHEDNVNAILVNQDDGCLFTGSS 253

Query: 181 DGCVKIWRRVYTEDSHTLTMTLKFQ 255
           DG VKIWRRVYTEDSHTLTMTLKFQ
Sbjct: 254 DGSVKIWRRVYTEDSHTLTMTLKFQ 278


>ref|XP_003523738.1| PREDICTED: LOW QUALITY PROTEIN: lissencephaly-1 homolog [Glycine
           max]
          Length = 448

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/85 (94%), Positives = 83/85 (97%)
 Frame = +1

Query: 1   VSCMAYYHSEGLLYTGSHDRTVKAWRISDRKCVDSFVAHEDNINAILVNQDDGCLFTCSS 180
           VSCMAYYHSEGLLYTGSHDRTVKAWR+SDRKCVDSFVAHEDN+NAILVNQDDGC+FT SS
Sbjct: 195 VSCMAYYHSEGLLYTGSHDRTVKAWRVSDRKCVDSFVAHEDNVNAILVNQDDGCVFTGSS 254

Query: 181 DGCVKIWRRVYTEDSHTLTMTLKFQ 255
           DG VKIWRRVYTEDSHTLTMTLKFQ
Sbjct: 255 DGSVKIWRRVYTEDSHTLTMTLKFQ 279


>ref|XP_002281362.2| PREDICTED: uncharacterized WD repeat-containing protein
           alr2800-like [Vitis vinifera]
          Length = 400

 Score =  162 bits (411), Expect = 2e-38
 Identities = 71/85 (83%), Positives = 81/85 (95%)
 Frame = +1

Query: 1   VSCMAYYHSEGLLYTGSHDRTVKAWRISDRKCVDSFVAHEDNINAILVNQDDGCLFTCSS 180
           +SCMAYYH+EGLLYTGS DRTVKAWR+SD++CVDSFVAHEDN+NAI+VNQ+DGCLFTCSS
Sbjct: 139 ISCMAYYHAEGLLYTGSWDRTVKAWRVSDKQCVDSFVAHEDNVNAIVVNQEDGCLFTCSS 198

Query: 181 DGCVKIWRRVYTEDSHTLTMTLKFQ 255
           DG VK+WRR+Y E SHTLTMTLKFQ
Sbjct: 199 DGSVKVWRRLYVESSHTLTMTLKFQ 223


>emb|CBI20863.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  162 bits (411), Expect = 2e-38
 Identities = 71/85 (83%), Positives = 81/85 (95%)
 Frame = +1

Query: 1   VSCMAYYHSEGLLYTGSHDRTVKAWRISDRKCVDSFVAHEDNINAILVNQDDGCLFTCSS 180
           +SCMAYYH+EGLLYTGS DRTVKAWR+SD++CVDSFVAHEDN+NAI+VNQ+DGCLFTCSS
Sbjct: 187 ISCMAYYHAEGLLYTGSWDRTVKAWRVSDKQCVDSFVAHEDNVNAIVVNQEDGCLFTCSS 246

Query: 181 DGCVKIWRRVYTEDSHTLTMTLKFQ 255
           DG VK+WRR+Y E SHTLTMTLKFQ
Sbjct: 247 DGSVKVWRRLYVESSHTLTMTLKFQ 271


>emb|CAN66946.1| hypothetical protein VITISV_020093 [Vitis vinifera]
          Length = 432

 Score =  162 bits (411), Expect = 2e-38
 Identities = 71/85 (83%), Positives = 81/85 (95%)
 Frame = +1

Query: 1   VSCMAYYHSEGLLYTGSHDRTVKAWRISDRKCVDSFVAHEDNINAILVNQDDGCLFTCSS 180
           +SCMAYYH+EGLLYTGS DRTVKAWR+SD++CVDSFVAHEDN+NAI+VNQ+DGCLFTCSS
Sbjct: 187 ISCMAYYHAEGLLYTGSWDRTVKAWRVSDKQCVDSFVAHEDNVNAIVVNQEDGCLFTCSS 246

Query: 181 DGCVKIWRRVYTEDSHTLTMTLKFQ 255
           DG VK+WRR+Y E SHTLTMTLKFQ
Sbjct: 247 DGSVKVWRRLYVESSHTLTMTLKFQ 271


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