BLASTX nr result

ID: Glycyrrhiza23_contig00030344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030344
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550120.1| PREDICTED: GATA transcription factor 12-like...    70   1e-10
ref|XP_003588383.1| GATA transcription factor [Medicago truncatu...    69   3e-10
ref|XP_003545608.1| PREDICTED: GATA transcription factor 12-like...    69   4e-10
ref|XP_003527843.1| PREDICTED: GATA transcription factor 12-like...    69   5e-10
ref|XP_003603626.1| GATA transcription factor [Medicago truncatu...    69   5e-10

>ref|XP_003550120.1| PREDICTED: GATA transcription factor 12-like [Glycine max]
          Length = 366

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/90 (43%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
 Frame = -2

Query: 254 VFNPQVSVPAKARSKRTRGPPCNWTSRLLVLXXXXXXXXXXXXXXXXXSDTXXXXXXXXX 75
           +FN +VSVPAKARSKR+RGPPCNW SRLLVL                 +           
Sbjct: 160 IFNSEVSVPAKARSKRSRGPPCNWASRLLVLSPTSSSSDNEVVVPSPATAEPCPTPAKKM 219

Query: 74  XXXXXXXRDS------GDGGEGRKCLHCAT 3
                  +DS      G GG+GR+CLHCAT
Sbjct: 220 AKVGPRKKDSSSSDGNGSGGDGRRCLHCAT 249


>ref|XP_003588383.1| GATA transcription factor [Medicago truncatula]
           gi|355477431|gb|AES58634.1| GATA transcription factor
           [Medicago truncatula]
          Length = 344

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/85 (43%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = -2

Query: 254 VFNPQVSVPAKARSKRTRGPPCNWTSRLLVL-XXXXXXXXXXXXXXXXXSDTXXXXXXXX 78
           +FN +V VPAKARSKRTRGPPC+W+SRLLVL                    T        
Sbjct: 157 IFNKEVLVPAKARSKRTRGPPCDWSSRLLVLSQTTPSSSESEFLIPTPTLPTVTVPRKQA 216

Query: 77  XXXXXXXXRDSGDGGEGRKCLHCAT 3
                    D G GG+GR+CLHC T
Sbjct: 217 KTAPRRKDNDGGSGGDGRRCLHCMT 241


>ref|XP_003545608.1| PREDICTED: GATA transcription factor 12-like [Glycine max]
          Length = 383

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
 Frame = -2

Query: 254 VFNPQVSVPAKARSKRTRGPPCNWTSRLLVLXXXXXXXXXXXXXXXXXSD----TXXXXX 87
           +FN +VSVPAKARSKR+RGPPCNW SRLLVL                 ++          
Sbjct: 174 IFNSEVSVPAKARSKRSRGPPCNWASRLLVLSPTTSSSSDSEVTVPAPAEHGPAPAKKAA 233

Query: 86  XXXXXXXXXXXRDSGDGGEGRKCLHCAT 3
                        +G GG+GR+CLHCAT
Sbjct: 234 KAGPRKKDSGSDGNGSGGDGRRCLHCAT 261


>ref|XP_003527843.1| PREDICTED: GATA transcription factor 12-like [Glycine max]
          Length = 326

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/86 (46%), Positives = 44/86 (51%)
 Frame = -2

Query: 260 PGVFNPQVSVPAKARSKRTRGPPCNWTSRLLVLXXXXXXXXXXXXXXXXXSDTXXXXXXX 81
           P +FNPQVSV  KARSKRTRGPPCNWTSRL+VL                 S +       
Sbjct: 148 PVMFNPQVSVRGKARSKRTRGPPCNWTSRLVVL-----------SPNTTSSSSNSDAGKK 196

Query: 80  XXXXXXXXXRDSGDGGEGRKCLHCAT 3
                      +  G EGRKCLHCAT
Sbjct: 197 PATPRRREAAFAEGGSEGRKCLHCAT 222


>ref|XP_003603626.1| GATA transcription factor [Medicago truncatula]
           gi|355492674|gb|AES73877.1| GATA transcription factor
           [Medicago truncatula]
          Length = 318

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/80 (50%), Positives = 43/80 (53%)
 Frame = -2

Query: 242 QVSVPAKARSKRTRGPPCNWTSRLLVLXXXXXXXXXXXXXXXXXSDTXXXXXXXXXXXXX 63
           QVSVPAKARSKR+R PPCNWTSRLLVL                 + +             
Sbjct: 142 QVSVPAKARSKRSRVPPCNWTSRLLVL-------SPTTTTTTTTTTSSHSDTMAPPKKPS 194

Query: 62  XXXRDSGDGGEGRKCLHCAT 3
              RD  DGGEGRKCLHCAT
Sbjct: 195 PRKRDPNDGGEGRKCLHCAT 214


Top