BLASTX nr result
ID: Glycyrrhiza23_contig00030330
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00030330
(501 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001052201.1| Os04g0191000 [Oryza sativa Japonica Group] g... 139 4e-35
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [... 137 8e-35
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 140 8e-35
ref|XP_002443132.1| hypothetical protein SORBIDRAFT_08g010830 [S... 138 1e-34
gb|ACY01928.1| hypothetical protein [Beta vulgaris] 135 2e-34
>ref|NP_001052201.1| Os04g0191000 [Oryza sativa Japonica Group]
gi|38346036|emb|CAE01900.2| OSJNBa0059D20.8 [Oryza sativa
Japonica Group] gi|113563772|dbj|BAF14115.1| Os04g0191000
[Oryza sativa Japonica Group]
Length = 1463
Score = 139 bits (351), Expect(2) = 4e-35
Identities = 70/147 (47%), Positives = 85/147 (57%)
Frame = +3
Query: 60 LRKFVLFFFDDILVYSSLWEAXXXXXXXXXXXXXXXKLYAKFSKCQFRVPHVDYLGHVIS 239
LR+FVL FFDDIL+YS W +L+ K SKC F P V YLGHVIS
Sbjct: 656 LRRFVLVFFDDILIYSETWTDHLRHLRTVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVIS 715
Query: 240 REGVAAGPSKVQAIQQWTTPNSXXXXXXXXXXXXYYHRFVKNYASIAGPLTDLLEKNAFS 419
GVA P+KVQAI +W P S YY +FV NY +IA PLT L +K+ FS
Sbjct: 716 EAGVAMDPAKVQAIHEWLVPRSARAVRSFLGLAGYYRKFVHNYGTIAAPLTALTKKDGFS 775
Query: 420 WTDSAQQAFEALKTAMCSLPVLGLPNF 500
WT+ AF+ALK A+ S PVL +P+F
Sbjct: 776 WTEDTAAAFDALKAAVTSAPVLAMPDF 802
Score = 33.5 bits (75), Expect(2) = 4e-35
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 13 NAPSTFQATMNEVFRPFVNSY 75
NAP+TFQA MN+V RPF+ +
Sbjct: 639 NAPATFQALMNDVLRPFLRRF 659
>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 137 bits (345), Expect(2) = 8e-35
Identities = 70/147 (47%), Positives = 85/147 (57%)
Frame = +3
Query: 60 LRKFVLFFFDDILVYSSLWEAXXXXXXXXXXXXXXXKLYAKFSKCQFRVPHVDYLGHVIS 239
LRKFVL FFDDILVYS + + YA F KC F + YLGH+IS
Sbjct: 860 LRKFVLVFFDDILVYSPDMKTHLKHLETVLQLLHLHQFYANFKKCTFGSTRISYLGHIIS 919
Query: 240 REGVAAGPSKVQAIQQWTTPNSXXXXXXXXXXXXYYHRFVKNYASIAGPLTDLLEKNAFS 419
+GVA P KV+A+ QW P S YY RFVKNY IA PL D L+KN+F
Sbjct: 920 EQGVATDPEKVEAMLQWPLPKSVTELRGFLGFTGYYRRFVKNYGQIARPLRDQLKKNSFD 979
Query: 420 WTDSAQQAFEALKTAMCSLPVLGLPNF 500
W ++A AF+ALK A+ +LPVL LP+F
Sbjct: 980 WNEAATSAFQALKAAVSALPVLVLPDF 1006
Score = 34.7 bits (78), Expect(2) = 8e-35
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 10 SNAPSTFQATMNEVFRPFVNSY 75
+NAPSTFQ+ MN++FRP++ +
Sbjct: 842 TNAPSTFQSVMNDLFRPYLRKF 863
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 140 bits (353), Expect(2) = 8e-35
Identities = 71/147 (48%), Positives = 88/147 (59%)
Frame = +3
Query: 60 LRKFVLFFFDDILVYSSLWEAXXXXXXXXXXXXXXXKLYAKFSKCQFRVPHVDYLGHVIS 239
LRKFVL FFDDILVYSS E KL+AK SKC F VP V+YLGH IS
Sbjct: 746 LRKFVLVFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFIS 805
Query: 240 REGVAAGPSKVQAIQQWTTPNSXXXXXXXXXXXXYYHRFVKNYASIAGPLTDLLEKNAFS 419
+G+ P+K++A+++W P + YY RFV+++ IAGPL L + +AF
Sbjct: 806 AQGIETDPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALTKTDAFE 865
Query: 420 WTDSAQQAFEALKTAMCSLPVLGLPNF 500
WT AQQAFE LK A+C PVL LP F
Sbjct: 866 WTAVAQQAFEDLKAALCQAPVLSLPLF 892
Score = 31.6 bits (70), Expect(2) = 8e-35
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 10 SNAPSTFQATMNEVFRPFVNSY 75
+NAP+TFQ MN +F+PF+ +
Sbjct: 728 TNAPATFQGLMNFIFKPFLRKF 749
>ref|XP_002443132.1| hypothetical protein SORBIDRAFT_08g010830 [Sorghum bicolor]
gi|241943825|gb|EES16970.1| hypothetical protein
SORBIDRAFT_08g010830 [Sorghum bicolor]
Length = 1462
Score = 138 bits (347), Expect(2) = 1e-34
Identities = 69/147 (46%), Positives = 87/147 (59%)
Frame = +3
Query: 60 LRKFVLFFFDDILVYSSLWEAXXXXXXXXXXXXXXXKLYAKFSKCQFRVPHVDYLGHVIS 239
LR+FVL FFDDIL+YS+ W +L+ K SKC F V + YLGH+IS
Sbjct: 641 LRRFVLVFFDDILIYSTSWADHLRHLRAVLTVLQHHQLFVKRSKCAFGVSSISYLGHIIS 700
Query: 240 REGVAAGPSKVQAIQQWTTPNSXXXXXXXXXXXXYYHRFVKNYASIAGPLTDLLEKNAFS 419
GVA +KVQA+ W P S YY +FV++Y +IA PLT LL+K+ F+
Sbjct: 701 EAGVAMDSAKVQAVADWPQPRSARAVRGFLGLAGYYRKFVQDYGTIAAPLTALLKKDGFA 760
Query: 420 WTDSAQQAFEALKTAMCSLPVLGLPNF 500
WTD A AF+ALK A+ S PVL LPNF
Sbjct: 761 WTDDAAAAFQALKAAITSAPVLALPNF 787
Score = 33.5 bits (75), Expect(2) = 1e-34
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 13 NAPSTFQATMNEVFRPFVNSY 75
NAP+TFQA MN+V RPF+ +
Sbjct: 624 NAPATFQALMNDVLRPFLRRF 644
>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
Length = 1583
Score = 135 bits (340), Expect(2) = 2e-34
Identities = 70/147 (47%), Positives = 88/147 (59%)
Frame = +3
Query: 60 LRKFVLFFFDDILVYSSLWEAXXXXXXXXXXXXXXXKLYAKFSKCQFRVPHVDYLGHVIS 239
LRKFVL FFDDILVYS+ E L+A KC+F V YLGH+IS
Sbjct: 768 LRKFVLVFFDDILVYSTSLEQHMHHLNVVLGLLATNHLFANLKKCEFGKEEVAYLGHIIS 827
Query: 240 REGVAAGPSKVQAIQQWTTPNSXXXXXXXXXXXXYYHRFVKNYASIAGPLTDLLEKNAFS 419
+GVA PSKVQA+ W+ P++ YY RFVK YASIA PLT+ L+K++F
Sbjct: 828 SKGVAMDPSKVQAMMDWSIPSTLRELRGFLGLTGYYRRFVKGYASIAHPLTNQLKKDSFG 887
Query: 420 WTDSAQQAFEALKTAMCSLPVLGLPNF 500
W+ +A +AFE LK A+ PVL +PNF
Sbjct: 888 WSPAATRAFETLKRALTEAPVLQMPNF 914
Score = 35.4 bits (80), Expect(2) = 2e-34
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 10 SNAPSTFQATMNEVFRPFVNSY 75
+NAP+TFQA MNEVF+P++ +
Sbjct: 750 TNAPATFQALMNEVFKPYLRKF 771