BLASTX nr result

ID: Glycyrrhiza23_contig00030304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030304
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598334.1| F-box protein [Medicago truncatula] gi|35548...   106   2e-21
ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncat...   103   1e-20
ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncat...   100   9e-20
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    99   5e-19
gb|ACU22680.1| unknown [Glycine max]                                   99   5e-19

>ref|XP_003598334.1| F-box protein [Medicago truncatula] gi|355487382|gb|AES68585.1|
           F-box protein [Medicago truncatula]
          Length = 417

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/107 (50%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
 Frame = +2

Query: 2   DCLCFFSTKCYTILDFWIMKEYGNEESWTKLFTIPYPIYLEFYHKPP--YISEDDQLLLV 175
           DCLC F+  C    D W+MKEYGN++SWTKL+ IPY  Y   +  P   Y++EDDQLL+ 
Sbjct: 290 DCLCIFAN-CDMFWDVWVMKEYGNKDSWTKLYHIPYMRYRGLWINPKILYVNEDDQLLMK 348

Query: 176 V-----SQSRLIVHNSKIGTYKIREVQNWNAGMVPEVYVESLVSPCS 301
           V     S+ +L+V+NSK GT K  ++QN +  M PEVY+ES++SPCS
Sbjct: 349 VYDLGSSKVKLVVYNSKSGTLKFPKIQNIDYLMDPEVYIESVISPCS 395


>ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355501748|gb|AES82951.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 385

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/107 (50%), Positives = 71/107 (66%), Gaps = 7/107 (6%)
 Frame = +2

Query: 2   DCLCFFSTKCYTILDFWIMKEYGNEESWTKLFTIPY--PIYLEFYHKPPYISEDDQLLLV 175
           DCLC F T      D W+MKEYGN+ESWTKL+ +PY     L  Y K  Y+SEDD++L+ 
Sbjct: 280 DCLCIF-TSSDIFFDIWVMKEYGNKESWTKLYNVPYMEDRGLSSYTKVLYVSEDDKMLME 338

Query: 176 V-----SQSRLIVHNSKIGTYKIREVQNWNAGMVPEVYVESLVSPCS 301
                 S+ +L+V++SK GT KI  +QN N  M P+VY+ESL+SPCS
Sbjct: 339 FYELGSSKLKLVVYDSKNGTLKIPVIQNINRRMDPKVYIESLISPCS 385


>ref|XP_003594087.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483135|gb|AES64338.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 375

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/102 (50%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
 Frame = +2

Query: 2   DCLCFFSTKCYTILDFWIMKEYGNEESWTKLFTIPY--PIYLEFYHKPPYISEDDQLLLV 175
           DCLC  +    T  D W+MKEYGN +SWTKLF +PY   +    Y K  Y++EDDQ+LL 
Sbjct: 276 DCLCILAHSD-TFSDVWLMKEYGNNDSWTKLFRVPYMGDVGSCPYTKALYLTEDDQVLLK 334

Query: 176 VSQSRLIVHNSKIGTYKIREVQNWNAGMVPEVYVESLVSPCS 301
             Q+ L+V+NS+ GT+K  E+Q+ N  +VP+VY ESL+SPCS
Sbjct: 335 Y-QAELVVYNSRDGTFKTPEIQHINRWLVPQVYQESLISPCS 375


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/101 (52%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = +2

Query: 2   DCLCFFSTKCYTILDFWIMKEYGNEESWTKLFTIPYPIYLE--FYHKPPYISEDDQLLLV 175
           DCLC  S    T LD W+MK+YGN+ESWTKLF +PY    +   Y K   ISEDDQ+L+ 
Sbjct: 294 DCLCVLS-HADTFLDVWLMKDYGNKESWTKLFRVPYMGISDSYLYTKALCISEDDQVLME 352

Query: 176 VSQSRLIVHNSKIGTYKIREVQNWNAGMVPEVYVESLVSPC 298
            + S L V+NS+ GT KI ++Q+    M PEVY+ESL+SPC
Sbjct: 353 FN-SELAVYNSRNGTSKIPDIQDIYMYMTPEVYIESLISPC 392


>gb|ACU22680.1| unknown [Glycine max]
          Length = 393

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/101 (52%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = +2

Query: 2   DCLCFFSTKCYTILDFWIMKEYGNEESWTKLFTIPYPIYLE--FYHKPPYISEDDQLLLV 175
           DCLC  S    T LD W+MK+YGN+ESWTKLF +PY    +   Y K   ISEDDQ+L+ 
Sbjct: 294 DCLCVLS-HADTFLDVWLMKDYGNKESWTKLFRVPYMGISDSYLYTKALCISEDDQVLME 352

Query: 176 VSQSRLIVHNSKIGTYKIREVQNWNAGMVPEVYVESLVSPC 298
            + S L V+NS+ GT KI ++Q+    M PEVY+ESL+SPC
Sbjct: 353 FN-SELAVYNSRNGTSKIPDIQDIYMYMTPEVYIESLISPC 392


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