BLASTX nr result

ID: Glycyrrhiza23_contig00030278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030278
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula...   136   2e-30
emb|CBI32804.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   118   6e-25
ref|XP_003520482.1| PREDICTED: putative SWI/SNF-related matrix-a...   117   1e-24
ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223...   108   3e-22

>ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
            gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger,
            RING-type; ATP-requiring DNA helicase RecQ [Medicago
            truncatula] gi|355499950|gb|AES81153.1| DNA repair
            protein RAD5 [Medicago truncatula]
          Length = 844

 Score =  136 bits (343), Expect = 2e-30
 Identities = 69/89 (77%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    INLTASSRVYLMEPWWNPAIEEQAMDRVHRIGQKEAVKVVRLIAQNSIEERILMLQE-KK 177
            INLTA+SRVYLMEPWWNPA+EEQAMDRVHRIGQKE VK+VRLIA+NSIEE+ILMLQE KK
Sbjct: 756  INLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKIVRLIAKNSIEEKILMLQEKKK 815

Query: 178  KGITIKGSGRGSKDVLGIDKHDLRFVLQE 264
            K IT +GSGR S+D+ G+   DL FVL E
Sbjct: 816  KTITSRGSGRRSRDIAGMGIEDLHFVLGE 844


>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/87 (68%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
 Frame = +1

Query: 1   INLTASSRVYLMEPWWNPAIEEQAMDRVHRIGQKEAVKVVRLIAQNSIEERILMLQEKKK 180
           INLTA+SRVYL+EPWWNPA+EEQAMDRVHRIGQKE VK+VRLIA+NSIEERIL LQE+KK
Sbjct: 725 INLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERILELQERKK 784

Query: 181 GITIKGSG-RGSKDVLGIDKHDLRFVL 258
            +  +  G RG KD   +   DLR ++
Sbjct: 785 KLAKEAFGRRGLKDRREVGVEDLRMLM 811


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/87 (68%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
 Frame = +1

Query: 1    INLTASSRVYLMEPWWNPAIEEQAMDRVHRIGQKEAVKVVRLIAQNSIEERILMLQEKKK 180
            INLTA+SRVYL+EPWWNPA+EEQAMDRVHRIGQKE VK+VRLIA+NSIEERIL LQE+KK
Sbjct: 786  INLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERILELQERKK 845

Query: 181  GITIKGSG-RGSKDVLGIDKHDLRFVL 258
             +  +  G RG KD   +   DLR ++
Sbjct: 846  KLAKEAFGRRGLKDRREVGVEDLRMLM 872


>ref|XP_003520482.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1-like [Glycine max]
          Length = 823

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/86 (68%), Positives = 72/86 (83%)
 Frame = +1

Query: 1   INLTASSRVYLMEPWWNPAIEEQAMDRVHRIGQKEAVKVVRLIAQNSIEERILMLQEKKK 180
           INLT++SR+Y MEPWWN A+EEQAMDRVHRIGQKEAVK+VRLIAQNSIEE+IL+LQEKKK
Sbjct: 739 INLTSASRLYFMEPWWNHAVEEQAMDRVHRIGQKEAVKIVRLIAQNSIEEQILVLQEKKK 798

Query: 181 GITIKGSGRGSKDVLGIDKHDLRFVL 258
            +  + SG G K   G+  +D+ F+L
Sbjct: 799 QLPREPSGTGLK---GMGINDIHFLL 821


>ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1|
           helicase, putative [Ricinus communis]
          Length = 363

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/86 (61%), Positives = 65/86 (75%)
 Frame = +1

Query: 1   INLTASSRVYLMEPWWNPAIEEQAMDRVHRIGQKEAVKVVRLIAQNSIEERILMLQEKKK 180
           INL A+S+VYL+EPWWNPA+EEQAMDRVHRIGQKE V VVRLI +NSIEERIL +QE+KK
Sbjct: 276 INLAAASKVYLLEPWWNPAVEEQAMDRVHRIGQKEDVTVVRLITRNSIEERILEMQERKK 335

Query: 181 GITIKGSGRGSKDVLGIDKHDLRFVL 258
            +  +  GR       +   DLR ++
Sbjct: 336 KLAKEAFGRRGAKAHDVRTDDLRILM 361


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