BLASTX nr result

ID: Glycyrrhiza23_contig00030274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00030274
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550937.1| PREDICTED: vacuolar protein sorting-associat...   249   2e-64
ref|XP_002528763.1| transporter, putative [Ricinus communis] gi|...   238   6e-61
ref|XP_002329532.1| predicted protein [Populus trichocarpa] gi|2...   230   9e-59
ref|XP_002333205.1| predicted protein [Populus trichocarpa] gi|2...   228   5e-58
gb|AFK45941.1| unknown [Lotus japonicus]                              225   4e-57

>ref|XP_003550937.1| PREDICTED: vacuolar protein sorting-associated protein 55 homolog
           [Glycine max]
          Length = 138

 Score =  249 bits (636), Expect = 2e-64
 Identities = 122/138 (88%), Positives = 127/138 (92%)
 Frame = +3

Query: 18  MAELPGYFRYCLHTGKLVLLAILVSGGIVLQILACALYNNWWPMLTAITYVLLPMPLLFF 197
           MAELPGYFRYCL+TGKLVLL ILVSGG+VLQILACALYNNWWPMLTAITYVLLPMPLLF 
Sbjct: 1   MAELPGYFRYCLNTGKLVLLGILVSGGVVLQILACALYNNWWPMLTAITYVLLPMPLLFL 60

Query: 198 AGSEHSYLFSESDSSWVNATKFLTGASAVGSIAIPAILKHSGVIGWGALAMEFSSFFVFV 377
            GS  S LFSESDSSWVNATKFLTGASAVGSIAIPAILKHSGVIGWGA AME SSFFVFV
Sbjct: 61  VGSGRSSLFSESDSSWVNATKFLTGASAVGSIAIPAILKHSGVIGWGAFAMELSSFFVFV 120

Query: 378 LAIMCYIRMSDEDDYCIL 431
            AI+CYIR++DEDDY  L
Sbjct: 121 FAILCYIRINDEDDYSSL 138


>ref|XP_002528763.1| transporter, putative [Ricinus communis]
           gi|223531766|gb|EEF33585.1| transporter, putative
           [Ricinus communis]
          Length = 138

 Score =  238 bits (606), Expect = 6e-61
 Identities = 117/138 (84%), Positives = 123/138 (89%)
 Frame = +3

Query: 18  MAELPGYFRYCLHTGKLVLLAILVSGGIVLQILACALYNNWWPMLTAITYVLLPMPLLFF 197
           MA+LPGY   CL TGKL  LAILVSGGIVLQILACALYNNWWPMLT I YVLLPMPLLFF
Sbjct: 1   MADLPGYVHSCLQTGKLAALAILVSGGIVLQILACALYNNWWPMLTVIMYVLLPMPLLFF 60

Query: 198 AGSEHSYLFSESDSSWVNATKFLTGASAVGSIAIPAILKHSGVIGWGALAMEFSSFFVFV 377
           AGS+ S LF ESDS WVNATKFLTGASAVGSIAIPAILKHSGVIGWGALAME SSFFVFV
Sbjct: 61  AGSDGSSLFQESDSRWVNATKFLTGASAVGSIAIPAILKHSGVIGWGALAMELSSFFVFV 120

Query: 378 LAIMCYIRMSDEDDYCIL 431
           +AIMCYIRM+D+D Y +L
Sbjct: 121 MAIMCYIRMNDDDGYSML 138


>ref|XP_002329532.1| predicted protein [Populus trichocarpa] gi|222870241|gb|EEF07372.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  230 bits (587), Expect = 9e-59
 Identities = 112/138 (81%), Positives = 119/138 (86%)
 Frame = +3

Query: 18  MAELPGYFRYCLHTGKLVLLAILVSGGIVLQILACALYNNWWPMLTAITYVLLPMPLLFF 197
           MA+LPGY R CLHTGKL  LAILVSGGIVLQILACALYNNWWPMLT I YV LPMPLLFF
Sbjct: 1   MADLPGYMRACLHTGKLAFLAILVSGGIVLQILACALYNNWWPMLTVIMYVPLPMPLLFF 60

Query: 198 AGSEHSYLFSESDSSWVNATKFLTGASAVGSIAIPAILKHSGVIGWGALAMEFSSFFVFV 377
            GS+ S L +ESDS WVNATKFLTGAS +GSIAIP ILKH+GVIGWGALAME SSFFVFV
Sbjct: 61  VGSDSSTLLTESDSGWVNATKFLTGASVIGSIAIPVILKHAGVIGWGALAMELSSFFVFV 120

Query: 378 LAIMCYIRMSDEDDYCIL 431
           +AIMCYI  SDE DY +L
Sbjct: 121 IAIMCYIGTSDEADYSML 138


>ref|XP_002333205.1| predicted protein [Populus trichocarpa]
           gi|224138848|ref|XP_002326705.1| predicted protein
           [Populus trichocarpa] gi|222834027|gb|EEE72504.1|
           predicted protein [Populus trichocarpa]
           gi|222835094|gb|EEE73543.1| predicted protein [Populus
           trichocarpa]
          Length = 139

 Score =  228 bits (581), Expect = 5e-58
 Identities = 111/138 (80%), Positives = 119/138 (86%)
 Frame = +3

Query: 18  MAELPGYFRYCLHTGKLVLLAILVSGGIVLQILACALYNNWWPMLTAITYVLLPMPLLFF 197
           M +LPGY   CL TGKL  LAILVSGGI LQILACALYNNWWPMLT I YVLLPMPLLF+
Sbjct: 2   MPDLPGYMWACLRTGKLPFLAILVSGGIALQILACALYNNWWPMLTVIMYVLLPMPLLFY 61

Query: 198 AGSEHSYLFSESDSSWVNATKFLTGASAVGSIAIPAILKHSGVIGWGALAMEFSSFFVFV 377
           AGS  S L +ESDS WVNATKFLTGASA+GSIAIP ILKH+GVIGWGALAME SSFFVFV
Sbjct: 62  AGSNSSSLLTESDSGWVNATKFLTGASAIGSIAIPVILKHAGVIGWGALAMELSSFFVFV 121

Query: 378 LAIMCYIRMSDEDDYCIL 431
           +AIMCYI MSD+DDY +L
Sbjct: 122 IAIMCYIGMSDDDDYSML 139


>gb|AFK45941.1| unknown [Lotus japonicus]
          Length = 139

 Score =  225 bits (573), Expect = 4e-57
 Identities = 107/135 (79%), Positives = 120/135 (88%)
 Frame = +3

Query: 18  MAELPGYFRYCLHTGKLVLLAILVSGGIVLQILACALYNNWWPMLTAITYVLLPMPLLFF 197
           MAELPGY R CL+TGKL  LAILVSGGIVLQILACALYNNWWPML+AITYVLLPMPLLFF
Sbjct: 1   MAELPGYLRSCLNTGKLAFLAILVSGGIVLQILACALYNNWWPMLSAITYVLLPMPLLFF 60

Query: 198 AGSEHSYLFSESDSSWVNATKFLTGASAVGSIAIPAILKHSGVIGWGALAMEFSSFFVFV 377
           AGS+   +FSESD+SWVN TKFLTG+S VG IAIP+IL H+GVIGWGA AME SSFFVF+
Sbjct: 61  AGSDGDSIFSESDNSWVNFTKFLTGSSLVGGIAIPSILIHAGVIGWGAFAMELSSFFVFI 120

Query: 378 LAIMCYIRMSDEDDY 422
           LA++C++ MS EDDY
Sbjct: 121 LAVLCFLGMSGEDDY 135


Top